Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2102

Experiment: Gentamicin 0.0016 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.0016 mg/ml
2,227,475	+		Psest_2100	0.45	+0.7
2,227,503	-		Psest_2100	0.48	-1.1
2,227,511	+		Psest_2100	0.49	-0.3
2,227,512	-		Psest_2100	0.49	-1.9
2,227,858	+		Psest_2100	0.80	+0.9
2,227,859	-		Psest_2100	0.80	+0.3
2,227,859	-		Psest_2100	0.80	-0.9
2,227,973	-				+1.2
2,227,978	+				+0.2
2,227,978	+				+1.0
2,227,979	-				-1.0
2,228,080	+				+0.8
2,228,202	+		Psest_2101	0.34	-0.5
2,228,202	+		Psest_2101	0.34	+0.4
2,228,202	+		Psest_2101	0.34	-0.1
2,228,547	+				+0.1
2,228,548	-				+1.1
2,228,589	+				-0.2
2,228,589	+				-0.6
2,228,589	+				+0.9
2,228,590	-				+1.5
2,228,590	-				+0.8
2,228,590	-				+1.3
2,228,590	-				+1.6
2,228,614	-				-0.8
2,228,614	-				+1.2
2,228,766	+				-0.9
2,228,766	+				-1.4
2,228,766	+				+0.3
2,228,766	+				-3.3
2,228,766	+				+0.0
2,228,767	-				+1.2
2,228,767	-				+1.7
2,228,907	+		Psest_2102	0.12	+2.1
2,228,907	+		Psest_2102	0.12	-1.0
2,228,908	-		Psest_2102	0.12	+2.4
2,228,985	+		Psest_2102	0.14	-0.5
2,228,985	+		Psest_2102	0.14	+0.9
2,228,985	+		Psest_2102	0.14	+0.0
2,228,985	+		Psest_2102	0.14	+0.4
2,228,985	+		Psest_2102	0.14	+0.4
2,228,985	+		Psest_2102	0.14	-0.5
2,228,985	+		Psest_2102	0.14	+0.4
2,228,985	+		Psest_2102	0.14	-0.6
2,228,986	-		Psest_2102	0.14	+0.5
2,228,986	-		Psest_2102	0.14	+1.3
2,228,986	-		Psest_2102	0.14	+2.0
2,228,986	-		Psest_2102	0.14	+0.7
2,228,986	-		Psest_2102	0.14	+1.1
2,228,986	-		Psest_2102	0.14	+0.5
2,228,986	-		Psest_2102	0.14	+0.7
2,228,986	-		Psest_2102	0.14	+1.1
2,228,986	-		Psest_2102	0.14	-0.3
2,228,986	-		Psest_2102	0.14	+1.4
2,228,986	-		Psest_2102	0.14	-0.4
2,229,112	-		Psest_2102	0.17	-1.7
2,229,112	-		Psest_2102	0.17	+0.0
2,229,276	+		Psest_2102	0.22	+0.8
2,229,277	-		Psest_2102	0.22	+0.4
2,229,324	+		Psest_2102	0.23	-0.1
2,229,324	+		Psest_2102	0.23	+2.0
2,229,325	-		Psest_2102	0.23	+1.0
2,229,325	-		Psest_2102	0.23	+1.3
2,229,325	-		Psest_2102	0.23	+1.3
2,229,350	-		Psest_2102	0.24	+1.3
2,229,397	-		Psest_2102	0.25	+1.1
2,229,441	+		Psest_2102	0.26	+1.3
2,229,441	+		Psest_2102	0.26	+1.2
2,229,441	+		Psest_2102	0.26	+2.4
2,229,441	+		Psest_2102	0.26	-0.4
2,229,441	+		Psest_2102	0.26	+0.4
2,229,441	+		Psest_2102	0.26	+1.3
2,229,441	+		Psest_2102	0.26	+0.0
2,229,442	-		Psest_2102	0.26	+1.7
2,229,498	+		Psest_2102	0.28	+0.9
2,229,498	+		Psest_2102	0.28	+0.9
2,229,553	+		Psest_2102	0.29	+1.0
2,229,554	-		Psest_2102	0.29	-0.6
2,229,591	+		Psest_2102	0.30	+0.7
2,229,837	+		Psest_2102	0.37	-0.3
2,230,245	+		Psest_2102	0.48	+0.2
2,230,245	+		Psest_2102	0.48	+1.4
2,230,245	+		Psest_2102	0.48	+0.1
2,230,245	+		Psest_2102	0.48	+0.7
2,230,245	+		Psest_2102	0.48	-0.1
2,230,245	+		Psest_2102	0.48	-0.3
2,230,245	+		Psest_2102	0.48	+0.4
2,230,246	-		Psest_2102	0.48	+0.6
2,230,246	-		Psest_2102	0.48	+0.7
2,230,246	-		Psest_2102	0.48	+2.2
2,230,246	-		Psest_2102	0.48	+0.3
2,230,246	-		Psest_2102	0.48	+2.4
2,230,246	-		Psest_2102	0.48	-0.0
2,230,246	-		Psest_2102	0.48	+0.4
2,230,246	-		Psest_2102	0.48	+1.1
2,230,246	-		Psest_2102	0.48	+1.0
2,230,246	-		Psest_2102	0.48	-1.4
2,230,301	+		Psest_2102	0.49	-0.1
2,230,301	+		Psest_2102	0.49	-1.3
2,230,301	+		Psest_2102	0.49	+0.7
2,230,301	+		Psest_2102	0.49	+0.9
2,230,301	+		Psest_2102	0.49	+0.1
2,230,301	+		Psest_2102	0.49	-0.2
2,230,301	+		Psest_2102	0.49	+1.4
2,230,301	+		Psest_2102	0.49	-0.3
2,230,301	+		Psest_2102	0.49	+0.3
2,230,301	+		Psest_2102	0.49	+0.7
2,230,302	-		Psest_2102	0.49	+1.4
2,230,302	-		Psest_2102	0.49	+0.4
2,230,302	-		Psest_2102	0.49	+0.4
2,230,302	-		Psest_2102	0.49	-0.2
2,230,344	+		Psest_2102	0.51	-1.3
2,230,345	-		Psest_2102	0.51	+1.0
2,230,345	-		Psest_2102	0.51	+0.6
2,230,494	+		Psest_2102	0.55	+0.9
2,230,515	+		Psest_2102	0.55	-0.6
2,230,515	+		Psest_2102	0.55	-0.4
2,230,515	+		Psest_2102	0.55	+0.4
2,230,515	+		Psest_2102	0.55	-0.4
2,230,516	-		Psest_2102	0.55	+0.9
2,230,516	-		Psest_2102	0.55	+0.4
2,230,545	+		Psest_2102	0.56	-0.0
2,230,545	+		Psest_2102	0.56	-0.7
2,230,545	+		Psest_2102	0.56	+1.4
2,230,545	+		Psest_2102	0.56	-1.1
2,230,545	+		Psest_2102	0.56	-0.1
2,230,545	+		Psest_2102	0.56	+0.8
2,230,644	+		Psest_2102	0.59	+0.5
2,230,644	+		Psest_2102	0.59	+1.8
2,230,644	+		Psest_2102	0.59	+1.0
2,230,645	-		Psest_2102	0.59	+0.4
2,230,645	-		Psest_2102	0.59	+0.1
2,230,883	-		Psest_2102	0.65	+0.2
2,231,019	+		Psest_2102	0.69	-0.0
2,231,019	+		Psest_2102	0.69	-0.0
2,231,020	-		Psest_2102	0.69	+0.8
2,231,388	+		Psest_2102	0.79	-1.0
2,231,670	+		Psest_2102	0.87	+0.3
2,231,670	+		Psest_2102	0.87	-1.2
2,231,670	+		Psest_2102	0.87	-0.1
2,231,670	+		Psest_2102	0.87	+1.5
2,231,670	+		Psest_2102	0.87	+0.8
2,231,670	+		Psest_2102	0.87	-0.3
2,231,670	+		Psest_2102	0.87	+0.4
2,231,671	-		Psest_2102	0.87	-0.1
2,231,671	-		Psest_2102	0.87	+0.6
2,231,671	-		Psest_2102	0.87	+0.7
2,231,671	-		Psest_2102	0.87	+0.3
2,231,671	-		Psest_2102	0.87	+0.6
2,231,671	-		Psest_2102	0.87	+0.6
2,231,671	-		Psest_2102	0.87	+0.8
2,231,671	-		Psest_2102	0.87	+0.5
2,231,671	-		Psest_2102	0.87	+1.6
2,231,671	-		Psest_2102	0.87	+0.4
2,231,671	-		Psest_2102	0.87	+2.4
2,231,671	-		Psest_2102	0.87	+0.3
2,231,762	+		Psest_2102	0.89	+0.4
2,231,856	+				+1.4
2,231,856	+				+0.3
2,231,878	-				+0.9
2,231,946	+				-0.7
2,232,049	-				-2.5
2,232,069	+				-1.2
2,232,069	+				+0.4
2,232,070	-				+0.7
2,232,174	-				+0.0
2,232,208	+				+0.2
2,232,255	+				-1.8
2,232,296	+				-2.9
2,232,296	+				+0.0
2,232,296	+				-0.7
2,232,401	+				-1.5
2,232,458	+				+1.1
2,232,458	+				+0.5
2,232,531	-				-0.6
2,232,779	+		Psest_2103	0.20	-2.4
2,232,779	+		Psest_2103	0.20	-0.2
2,232,780	-		Psest_2103	0.20	-1.0
2,232,842	+		Psest_2103	0.23	-1.1
2,232,843	-		Psest_2103	0.23	-0.4
2,232,945	+		Psest_2103	0.27	-2.7
2,232,992	+		Psest_2103	0.29	-2.0
2,232,992	+		Psest_2103	0.29	-0.5
2,232,993	-		Psest_2103	0.29	-0.5
2,232,993	-		Psest_2103	0.29	-0.2