Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2029

Experiment: Gentamicin 0.0016 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.0016 mg/ml
2,148,477	+		Psest_2027	0.79	+0.3
2,148,543	+		Psest_2027	0.82	+1.8
2,148,543	+		Psest_2027	0.82	+2.5
2,148,621	+		Psest_2027	0.86	+0.6
2,148,769	+				+0.4
2,148,769	+				+1.2
2,149,450	+				-3.7
2,149,451	-				-0.8
2,149,451	-				-2.3
2,149,451	-				-1.9
2,149,579	+		Psest_2029	0.27	-0.1
2,149,588	+		Psest_2029	0.28	-1.4
2,149,588	+		Psest_2029	0.28	-1.1
2,149,589	-		Psest_2029	0.28	-0.4
2,149,607	+		Psest_2029	0.31	-2.6
2,149,700	+		Psest_2029	0.44	-2.3
2,149,700	+		Psest_2029	0.44	+1.0
2,149,726	+		Psest_2029	0.48	-2.0
2,149,726	+		Psest_2029	0.48	-1.2
2,149,727	-		Psest_2029	0.48	-3.0
2,149,731	-		Psest_2029	0.48	-0.4
2,149,758	-		Psest_2029	0.52	-0.7
2,149,759	+		Psest_2029	0.52	+0.7
2,149,759	+		Psest_2029	0.52	-2.2
2,149,759	+		Psest_2029	0.52	+0.3
2,149,759	+		Psest_2029	0.52	-0.7
2,149,759	+		Psest_2029	0.52	-1.4
2,149,759	+		Psest_2029	0.52	-3.0
2,149,759	+		Psest_2029	0.52	-1.8
2,149,759	+		Psest_2029	0.52	-0.9
2,149,759	+		Psest_2029	0.52	-2.8
2,149,760	-		Psest_2029	0.52	-1.1
2,149,760	-		Psest_2029	0.52	-1.1
2,149,760	-		Psest_2029	0.52	-1.1
2,149,760	-		Psest_2029	0.52	-1.4
2,149,760	-		Psest_2029	0.52	-1.7
2,149,768	+		Psest_2029	0.54	-0.6
2,149,768	+		Psest_2029	0.54	+0.0
2,149,768	+		Psest_2029	0.54	-2.4
2,149,769	-		Psest_2029	0.54	-2.6
2,149,769	-		Psest_2029	0.54	-2.6
2,149,775	+		Psest_2029	0.55	-1.9
2,149,775	+		Psest_2029	0.55	-0.2
2,149,776	-		Psest_2029	0.55	-0.1
2,149,777	+		Psest_2029	0.55	-0.6
2,149,778	-		Psest_2029	0.55	-2.3
2,149,975	+		Psest_2029	0.83	-0.6
2,150,041	+				-2.4
2,150,041	+				-0.9
2,150,042	-				-3.5
2,150,042	-				+0.7
2,150,042	-				-1.7
2,150,127	+				-1.9
2,150,127	+				+0.4
2,150,127	+				+0.7
2,150,127	+				-0.5
2,150,127	+				-1.5
2,150,127	+				-0.6
2,150,128	-				-0.1
2,150,128	-				-1.6
2,150,169	+				-1.0
2,150,170	-				-2.2
2,150,305	+		Psest_2030	0.23	-1.8
2,150,306	-		Psest_2030	0.23	-0.9
2,150,371	+		Psest_2030	0.33	-0.6
2,150,468	+		Psest_2030	0.47	+0.2
2,150,468	+		Psest_2030	0.47	-0.8
2,150,468	+		Psest_2030	0.47	+0.8
2,150,468	+		Psest_2030	0.47	-0.4
2,150,469	-		Psest_2030	0.47	-0.1
2,150,469	-		Psest_2030	0.47	-0.5
2,150,469	-		Psest_2030	0.47	-1.5
2,150,469	-		Psest_2030	0.47	+2.6
2,150,773	+				-1.0
2,150,773	+				-0.6
2,150,773	+				+1.0
2,150,773	+				+0.3
2,150,774	-				+0.5
2,150,886	+				-0.1
2,150,886	+				-3.1