Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1866

Experiment: Gentamicin 0.0016 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.0016 mg/ml
1,976,021	+				-2.0
1,976,022	-				+0.7
1,976,092	+				-1.7
1,976,092	+				-1.0
1,976,092	+				+0.7
1,976,092	+				-2.1
1,976,092	+				+0.9
1,976,092	+				-0.3
1,976,092	+				-0.5
1,976,092	+				-0.8
1,976,092	+				-1.2
1,976,092	+				-0.1
1,976,092	+				-0.2
1,976,092	+				-1.0
1,976,093	-				-1.4
1,976,093	-				-0.4
1,976,093	-				+0.6
1,976,093	-				+0.8
1,976,093	-				+0.5
1,976,093	-				-0.3
1,976,327	+		Psest_1865	0.25	+0.2
1,976,327	+		Psest_1865	0.25	-4.3
1,976,328	-		Psest_1865	0.25	+0.3
1,976,379	+		Psest_1865	0.32	-0.5
1,976,379	+		Psest_1865	0.32	+0.3
1,976,379	+		Psest_1865	0.32	-0.3
1,976,379	+		Psest_1865	0.32	-0.8
1,976,380	-		Psest_1865	0.32	-2.0
1,976,392	+		Psest_1865	0.34	+0.3
1,976,393	-		Psest_1865	0.34	-1.0
1,976,411	+		Psest_1865	0.36	-1.6
1,976,420	+		Psest_1865	0.38	-0.8
1,976,420	+		Psest_1865	0.38	-1.2
1,976,420	+		Psest_1865	0.38	-3.5
1,976,420	+		Psest_1865	0.38	+0.3
1,976,420	+		Psest_1865	0.38	-0.1
1,976,421	-		Psest_1865	0.38	-1.8
1,976,421	-		Psest_1865	0.38	-1.1
1,976,424	+		Psest_1865	0.38	+0.0
1,976,424	+		Psest_1865	0.38	-0.2
1,976,424	+		Psest_1865	0.38	+1.9
1,976,424	+		Psest_1865	0.38	-0.7
1,976,424	+		Psest_1865	0.38	+0.7
1,976,424	+		Psest_1865	0.38	+0.2
1,976,424	+		Psest_1865	0.38	+0.2
1,976,424	+		Psest_1865	0.38	-0.5
1,976,424	+		Psest_1865	0.38	-2.5
1,976,424	+		Psest_1865	0.38	-0.3
1,976,424	+		Psest_1865	0.38	-0.0
1,976,424	+		Psest_1865	0.38	+1.0
1,976,424	+		Psest_1865	0.38	-1.9
1,976,425	-		Psest_1865	0.38	-1.5
1,976,425	-		Psest_1865	0.38	-0.1
1,976,425	-		Psest_1865	0.38	-3.3
1,976,425	-		Psest_1865	0.38	-0.7
1,976,425	-		Psest_1865	0.38	-0.1
1,976,425	-		Psest_1865	0.38	+0.6
1,976,425	-		Psest_1865	0.38	+0.6
1,976,425	-		Psest_1865	0.38	-1.0
1,976,425	-		Psest_1865	0.38	-1.4
1,976,425	-		Psest_1865	0.38	-1.0
1,976,425	-		Psest_1865	0.38	+0.2
1,976,475	+		Psest_1865	0.45	-0.1
1,976,475	+		Psest_1865	0.45	-0.1
1,976,475	+		Psest_1865	0.45	-0.4
1,976,475	+		Psest_1865	0.45	-0.3
1,976,475	+		Psest_1865	0.45	-0.4
1,976,475	+		Psest_1865	0.45	-0.8
1,976,475	+		Psest_1865	0.45	-0.8
1,976,475	+		Psest_1865	0.45	-1.5
1,976,476	-		Psest_1865	0.45	-0.4
1,976,476	-		Psest_1865	0.45	-0.4
1,976,490	+		Psest_1865	0.47	+1.6
1,976,491	-		Psest_1865	0.48	-2.7
1,976,491	-		Psest_1865	0.48	-0.3
1,976,544	+		Psest_1865	0.55	+0.5
1,976,932	-				-1.9
1,976,932	-				-1.4
1,976,932	-				-0.2
1,976,932	-				-3.5
1,976,932	-				-0.3
1,976,932	-				-0.9
1,976,932	-				-1.9
1,976,968	+		Psest_1866	0.12	+0.4
1,976,968	+		Psest_1866	0.12	-0.7
1,976,968	+		Psest_1866	0.12	-0.2
1,976,968	+		Psest_1866	0.12	-1.8
1,976,969	-		Psest_1866	0.13	-0.7
1,976,969	-		Psest_1866	0.13	-0.8
1,976,969	-		Psest_1866	0.13	-0.5
1,976,969	-		Psest_1866	0.13	-0.9
1,976,969	-		Psest_1866	0.13	-0.9
1,976,969	-		Psest_1866	0.13	-1.4
1,976,969	-		Psest_1866	0.13	-1.6
1,977,073	+		Psest_1866	0.37	-0.5
1,977,073	+		Psest_1866	0.37	+1.2
1,977,073	+		Psest_1866	0.37	+0.3
1,977,073	+		Psest_1866	0.37	+0.4
1,977,073	+		Psest_1866	0.37	-0.4
1,977,074	-		Psest_1866	0.38	-1.0
1,977,074	-		Psest_1866	0.38	-2.7
1,977,096	-		Psest_1866	0.43	+0.9
1,977,176	+		Psest_1866	0.62	+0.9
1,977,237	+		Psest_1866	0.76	+0.2
1,977,237	+		Psest_1866	0.76	-3.2
1,977,579	+				-1.8
1,977,579	+				-1.5
1,977,580	-		Psest_1868	0.10	-0.0
1,977,884	+		Psest_1868	0.62	-2.0
1,977,884	+		Psest_1868	0.62	+1.4
1,977,885	-		Psest_1868	0.62	+0.4
1,977,885	-		Psest_1868	0.62	-0.5
1,977,885	-		Psest_1868	0.62	-1.0
1,977,933	+		Psest_1868	0.70	+0.2
1,977,933	+		Psest_1868	0.70	-1.5
1,977,933	+		Psest_1868	0.70	-2.2
1,977,933	+		Psest_1868	0.70	+0.8
1,978,032	+		Psest_1868	0.87	-1.0
1,978,033	-		Psest_1868	0.87	-2.0
1,978,033	-		Psest_1868	0.87	+0.0
1,978,116	+				-0.3
1,978,116	+				-1.7
1,978,183	+				-2.1
1,978,252	+				+0.3
1,978,252	+				+0.8
1,978,252	+				-0.3
1,978,252	+				-1.8
1,978,253	-				-0.1
1,978,253	-				+0.2
1,978,254	+				+0.7
1,978,254	+				+0.4
1,978,254	+				+0.1
1,978,254	+				-1.5
1,978,255	-				-1.2
1,978,255	-				-0.4