Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1853

Experiment: Gentamicin 0.0016 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.0016 mg/ml
1,956,525	+		Psest_1851	0.81	-0.9
1,956,525	+		Psest_1851	0.81	+0.5
1,956,525	+		Psest_1851	0.81	+0.4
1,956,526	-		Psest_1851	0.81	-0.3
1,956,526	-		Psest_1851	0.81	-0.6
1,956,526	-		Psest_1851	0.81	-0.5
1,956,559	+		Psest_1851	0.84	-0.9
1,956,631	+		Psest_1851	0.90	-0.4
1,956,631	+		Psest_1851	0.90	-0.6
1,956,631	+		Psest_1851	0.90	-0.7
1,956,632	-		Psest_1851	0.90	+0.2
1,956,632	-		Psest_1851	0.90	-0.2
1,956,874	+		Psest_1852	0.18	+0.4
1,956,874	+		Psest_1852	0.18	+0.7
1,956,875	-		Psest_1852	0.18	+0.1
1,956,875	-		Psest_1852	0.18	-0.6
1,956,875	-		Psest_1852	0.18	+0.7
1,956,875	-		Psest_1852	0.18	-1.5
1,956,875	-		Psest_1852	0.18	-0.5
1,956,878	+		Psest_1852	0.19	-2.2
1,956,878	+		Psest_1852	0.19	+0.6
1,956,879	-		Psest_1852	0.19	+0.1
1,956,879	-		Psest_1852	0.19	-2.0
1,956,879	-		Psest_1852	0.19	+0.8
1,956,879	-		Psest_1852	0.19	-0.6
1,957,019	-		Psest_1852	0.54	+0.4
1,957,578	+		Psest_1853	0.38	-1.0
1,957,578	+		Psest_1853	0.38	-1.1
1,957,578	+		Psest_1853	0.38	-2.4
1,957,578	+		Psest_1853	0.38	-0.5
1,957,579	-		Psest_1853	0.38	+0.1
1,957,579	-		Psest_1853	0.38	+0.5
1,957,686	+		Psest_1853	0.51	+0.0
1,957,692	+		Psest_1853	0.51	+0.3
1,957,693	-		Psest_1853	0.51	+0.1
1,957,693	-		Psest_1853	0.51	-2.8
1,957,693	-		Psest_1853	0.51	+0.7
1,957,693	-		Psest_1853	0.51	-0.9
1,957,824	+		Psest_1853	0.67	-1.5
1,957,824	+		Psest_1853	0.67	+0.0
1,957,824	+		Psest_1853	0.67	+0.5
1,957,824	+		Psest_1853	0.67	-0.9
1,957,824	+		Psest_1853	0.67	-1.7
1,957,824	+		Psest_1853	0.67	-0.9
1,957,824	+		Psest_1853	0.67	-2.2
1,957,825	-		Psest_1853	0.67	-0.7
1,957,825	-		Psest_1853	0.67	-0.7
1,957,825	-		Psest_1853	0.67	-2.2
1,957,825	-		Psest_1853	0.67	-1.8
1,957,890	+		Psest_1853	0.75	+0.2
1,957,890	+		Psest_1853	0.75	-1.4
1,957,891	-		Psest_1853	0.75	-1.5
1,957,891	-		Psest_1853	0.75	-2.3
1,958,079	+				-2.5
1,958,079	+				-0.9
1,958,080	-				-0.6
1,958,080	-				-0.6
1,958,080	-				-2.0
1,958,080	-				-0.2
1,958,080	-				-0.9
1,958,080	-				-3.4
1,958,147	+				-0.8
1,958,148	-				-0.0
1,958,163	+				-0.6
1,958,163	+				+0.4
1,958,163	+				-0.6
1,958,165	+				-0.6
1,958,166	-				-1.0
1,958,166	-				-0.3
1,958,252	-				-1.0
1,958,411	+		Psest_1854	0.15	-0.6
1,958,412	-		Psest_1854	0.15	-0.8
1,958,494	+		Psest_1854	0.23	+0.4
1,958,533	+		Psest_1854	0.26	+0.2
1,958,534	-		Psest_1854	0.27	-0.8
1,958,534	-		Psest_1854	0.27	-2.9
1,958,534	-		Psest_1854	0.27	-1.2
1,958,534	-		Psest_1854	0.27	-1.0
1,958,647	-		Psest_1854	0.37	-0.3
1,958,803	+		Psest_1854	0.52	-0.3
1,958,804	-		Psest_1854	0.52	-1.4
1,958,804	-		Psest_1854	0.52	+0.4