Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1478

Experiment: Gentamicin 0.0016 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.0016 mg/ml
1,582,276	+				+0.1
1,582,277	-				-2.2
1,583,142	+		Psest_1478	0.12	-0.4
1,583,142	+		Psest_1478	0.12	+1.1
1,583,142	+		Psest_1478	0.12	+0.7
1,583,142	+		Psest_1478	0.12	+2.1
1,583,142	+		Psest_1478	0.12	+1.0
1,583,142	+		Psest_1478	0.12	+0.8
1,583,143	-		Psest_1478	0.12	-0.4
1,583,143	-		Psest_1478	0.12	-0.3
1,583,143	-		Psest_1478	0.12	+0.2
1,583,143	-		Psest_1478	0.12	-0.3
1,583,143	-		Psest_1478	0.12	+0.1
1,583,143	-		Psest_1478	0.12	-0.1
1,583,143	-		Psest_1478	0.12	+2.0
1,583,143	-		Psest_1478	0.12	+0.2
1,583,143	-		Psest_1478	0.12	+0.5
1,583,196	+		Psest_1478	0.25	+0.1
1,583,196	+		Psest_1478	0.25	+0.8
1,583,196	+		Psest_1478	0.25	+2.0
1,583,196	+		Psest_1478	0.25	+1.2
1,583,197	-		Psest_1478	0.25	+0.9
1,583,244	+		Psest_1478	0.37	+0.2
1,583,244	+		Psest_1478	0.37	-1.8
1,583,244	+		Psest_1478	0.37	+0.4
1,583,244	+		Psest_1478	0.37	+0.6
1,583,257	+		Psest_1478	0.40	+0.8
1,583,378	+		Psest_1478	0.69	-1.0
1,583,488	+				+0.4
1,583,489	-				+1.3
1,583,667	-		Psest_1479	0.28	-1.9
1,583,667	-		Psest_1479	0.28	-2.9
1,583,669	-		Psest_1479	0.29	-4.2
1,583,833	+		Psest_1479	0.56	-2.4
1,583,833	+		Psest_1479	0.56	-1.5
1,583,833	+		Psest_1479	0.56	-1.6
1,583,834	-		Psest_1479	0.56	-1.4
1,583,834	-		Psest_1479	0.56	-2.7
1,583,834	-		Psest_1479	0.56	-1.6
1,583,921	-		Psest_1479	0.70	-3.4
1,584,070	+				-2.5
1,584,071	-				-1.7
1,584,073	+				-1.1
1,584,073	+				-2.9
1,584,073	+				-4.4
1,584,073	+				-1.1
1,584,074	-				-1.7
1,584,074	-				-0.4
1,584,074	-				-3.0
1,584,074	-				-0.7
1,584,074	-				-0.9
1,584,088	+				-0.5
1,584,088	+				-3.2
1,584,089	-				-2.4
1,584,089	-				-2.7
1,584,089	-				-0.8
1,584,089	-				-1.1
1,584,089	-				-3.7
1,584,089	-				-1.7
1,584,256	-		Psest_1480	0.41	-0.6
1,584,256	-		Psest_1480	0.41	-0.1
1,584,439	+		Psest_1480	0.88	-1.8
1,584,440	-		Psest_1480	0.88	+1.0
1,584,455	+				-2.5
1,584,455	+				-2.4
1,584,456	-				-1.8
1,584,456	-				-0.3
1,584,456	-				-0.3
1,584,456	-				-0.0
1,584,456	-				-2.5
1,584,456	-				-1.5
1,584,456	-				-1.0
1,584,487	+				-0.3