Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1275

Experiment: Gentamicin 0.0016 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.0016 mg/ml
1,377,263	+		Psest_1273	0.87	+1.0
1,377,269	-		Psest_1273	0.88	-0.2
1,377,344	+				-0.2
1,377,345	-				-0.4
1,377,373	+				+1.4
1,377,373	+				+0.4
1,377,396	-				+0.0
1,377,497	+		Psest_1274	0.11	-0.8
1,377,498	-		Psest_1274	0.11	+0.4
1,377,568	-		Psest_1274	0.21	-2.1
1,377,568	-		Psest_1274	0.21	-0.0
1,377,568	-		Psest_1274	0.21	-0.9
1,377,603	+		Psest_1274	0.26	-2.3
1,377,618	+		Psest_1274	0.28	-0.2
1,377,618	+		Psest_1274	0.28	+0.8
1,377,618	+		Psest_1274	0.28	-0.4
1,377,618	+		Psest_1274	0.28	-0.2
1,377,618	+		Psest_1274	0.28	-1.0
1,377,619	-		Psest_1274	0.28	-0.9
1,377,619	-		Psest_1274	0.28	+0.2
1,377,619	-		Psest_1274	0.28	-1.8
1,377,619	-		Psest_1274	0.28	+0.4
1,377,619	-		Psest_1274	0.28	-0.7
1,377,619	-		Psest_1274	0.28	-0.1
1,377,619	-		Psest_1274	0.28	-0.2
1,377,624	+		Psest_1274	0.29	+0.7
1,377,624	+		Psest_1274	0.29	-0.2
1,377,624	+		Psest_1274	0.29	-0.4
1,377,624	+		Psest_1274	0.29	+0.8
1,377,624	+		Psest_1274	0.29	-2.8
1,377,624	+		Psest_1274	0.29	-2.3
1,377,624	+		Psest_1274	0.29	-1.3
1,377,624	+		Psest_1274	0.29	-0.2
1,377,624	+		Psest_1274	0.29	+0.8
1,377,624	+		Psest_1274	0.29	-0.5
1,377,624	+		Psest_1274	0.29	+0.1
1,377,624	+		Psest_1274	0.29	-0.8
1,377,624	+		Psest_1274	0.29	+0.1
1,377,625	-		Psest_1274	0.29	+0.7
1,377,651	+		Psest_1274	0.32	+1.2
1,377,652	-		Psest_1274	0.33	-1.1
1,377,902	-		Psest_1274	0.68	-2.3
1,377,902	-		Psest_1274	0.68	-0.4
1,377,952	-		Psest_1274	0.75	-0.2
1,377,952	-		Psest_1274	0.75	+0.0
1,378,003	-		Psest_1274	0.82	-0.3
1,378,026	+		Psest_1274	0.85	+0.2
1,378,026	+		Psest_1274	0.85	+1.2
1,378,026	+		Psest_1274	0.85	-0.7
1,378,026	+		Psest_1274	0.85	-0.9
1,378,026	+		Psest_1274	0.85	+0.4
1,378,026	+		Psest_1274	0.85	-0.8
1,378,026	+		Psest_1274	0.85	+1.7
1,378,026	+		Psest_1274	0.85	+0.8
1,378,026	+		Psest_1274	0.85	-2.7
1,378,026	+		Psest_1274	0.85	+0.3
1,378,027	-		Psest_1274	0.85	-0.1
1,378,027	-		Psest_1274	0.85	+0.7
1,378,027	-		Psest_1274	0.85	+1.2
1,378,027	-		Psest_1274	0.85	-2.2
1,378,027	-		Psest_1274	0.85	-0.8
1,378,080	+				-1.2
1,378,185	+				-1.3
1,378,197	+				-0.6
1,378,212	-				-0.6
1,378,212	-				+1.2
1,378,212	-				+0.3
1,378,226	+				-1.1
1,378,564	+		Psest_1275	0.39	+0.2
1,378,565	-		Psest_1275	0.39	-1.3
1,378,622	-		Psest_1275	0.45	-1.2
1,378,622	-		Psest_1275	0.45	-1.5
1,378,622	-		Psest_1275	0.45	+0.2
1,378,622	-		Psest_1275	0.45	-1.2
1,378,712	+		Psest_1275	0.56	-1.1
1,378,864	+		Psest_1275	0.74	+0.8
1,378,864	+		Psest_1275	0.74	-0.2
1,378,864	+		Psest_1275	0.74	-0.5
1,378,864	+		Psest_1275	0.74	+1.4
1,378,864	+		Psest_1275	0.74	+0.5
1,378,864	+		Psest_1275	0.74	+2.3
1,378,865	-		Psest_1275	0.74	+2.2
1,378,865	-		Psest_1275	0.74	-2.4
1,378,865	-		Psest_1275	0.74	-2.0
1,378,865	-		Psest_1275	0.74	-2.5
1,378,865	-		Psest_1275	0.74	-1.6
1,378,865	-		Psest_1275	0.74	-3.5
1,378,865	-		Psest_1275	0.74	+0.1
1,378,865	-		Psest_1275	0.74	-3.9
1,378,865	-		Psest_1275	0.74	-0.6
1,378,876	+		Psest_1275	0.75	-1.4
1,378,876	+		Psest_1275	0.75	-0.7
1,378,876	+		Psest_1275	0.75	-0.7
1,378,876	+		Psest_1275	0.75	-0.7
1,378,876	+		Psest_1275	0.75	+2.0
1,378,876	+		Psest_1275	0.75	-0.5
1,378,876	+		Psest_1275	0.75	-1.2
1,378,877	-		Psest_1275	0.75	-1.8
1,378,877	-		Psest_1275	0.75	-0.5
1,378,877	-		Psest_1275	0.75	-1.2
1,378,877	-		Psest_1275	0.75	-1.6
1,378,877	-		Psest_1275	0.75	-1.3
1,378,923	-		Psest_1275	0.80	-0.4
1,378,923	-		Psest_1275	0.80	-0.4
1,379,005	+				+0.4
1,379,005	+				+0.8
1,379,005	+				+0.1
1,379,005	+				+0.4
1,379,005	+				+0.2
1,379,006	-				+1.0
1,379,006	-				-0.2
1,379,006	-				+1.3
1,379,006	-				+1.7
1,379,006	-				+0.6
1,379,006	-				-0.6
1,379,006	-				+0.5
1,379,006	-				-0.0
1,379,105	+				-0.2
1,379,221	-				+1.3
1,379,221	-				+0.2
1,379,742	+		Psest_1276	0.53	+0.3
1,379,743	-		Psest_1276	0.53	-0.5
1,379,743	-		Psest_1276	0.53	-1.1
1,379,814	+		Psest_1276	0.60	-0.9
1,379,814	+		Psest_1276	0.60	-1.2
1,379,815	-		Psest_1276	0.60	+0.2
1,379,815	-		Psest_1276	0.60	+0.4
1,379,815	-		Psest_1276	0.60	-0.7
1,379,889	+		Psest_1276	0.67	-0.1
1,379,889	+		Psest_1276	0.67	+0.5
1,379,889	+		Psest_1276	0.67	-0.8
1,379,889	+		Psest_1276	0.67	+0.7
1,379,889	+		Psest_1276	0.67	+0.4
1,379,889	+		Psest_1276	0.67	+0.1
1,379,889	+		Psest_1276	0.67	-0.5
1,379,890	-		Psest_1276	0.67	+0.6
1,379,890	-		Psest_1276	0.67	-0.1
1,380,067	-		Psest_1276	0.84	+0.5