Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1210

Experiment: Gentamicin 0.0016 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.0016 mg/ml
1,312,558	-		Psest_1209	0.10	-0.3
1,312,558	-		Psest_1209	0.10	+1.2
1,312,731	+		Psest_1209	0.31	-0.4
1,312,731	+		Psest_1209	0.31	+1.2
1,312,732	-		Psest_1209	0.31	+1.8
1,312,734	+		Psest_1209	0.31	+0.1
1,312,734	+		Psest_1209	0.31	+1.0
1,312,735	-		Psest_1209	0.31	-1.5
1,312,735	-		Psest_1209	0.31	-2.2
1,312,812	+		Psest_1209	0.40	+0.2
1,312,812	+		Psest_1209	0.40	-0.7
1,312,812	+		Psest_1209	0.40	-1.4
1,312,812	+		Psest_1209	0.40	+0.2
1,312,812	+		Psest_1209	0.40	-0.1
1,312,812	+		Psest_1209	0.40	+0.2
1,312,812	+		Psest_1209	0.40	-0.8
1,312,812	+		Psest_1209	0.40	+0.2
1,312,813	-		Psest_1209	0.41	+0.6
1,312,813	-		Psest_1209	0.41	+1.6
1,312,813	-		Psest_1209	0.41	+1.6
1,313,145	+		Psest_1209	0.80	+0.7
1,313,146	-		Psest_1209	0.80	-0.6
1,313,146	-		Psest_1209	0.80	-1.6
1,313,146	-		Psest_1209	0.80	+1.8
1,313,146	-		Psest_1209	0.80	+1.7
1,313,146	-		Psest_1209	0.80	+1.8
1,313,175	+		Psest_1209	0.83	+0.6
1,313,176	-		Psest_1209	0.83	+0.5
1,313,415	+				+2.2
1,313,416	-				+3.2
1,313,416	-				-1.2
1,313,717	+		Psest_1210	0.12	+0.5
1,313,717	+		Psest_1210	0.12	+0.1
1,313,717	+		Psest_1210	0.12	-0.1
1,313,718	-		Psest_1210	0.12	+2.6
1,313,718	-		Psest_1210	0.12	+0.9
1,313,885	+		Psest_1210	0.19	-0.0
1,313,885	+		Psest_1210	0.19	+0.2
1,313,885	+		Psest_1210	0.19	+0.0
1,313,885	+		Psest_1210	0.19	+0.3
1,313,943	-		Psest_1210	0.22	+0.8
1,313,943	-		Psest_1210	0.22	+0.8
1,313,943	-		Psest_1210	0.22	+0.4
1,313,945	+		Psest_1210	0.22	+0.6
1,313,945	+		Psest_1210	0.22	+1.2
1,313,945	+		Psest_1210	0.22	+0.1
1,313,945	+		Psest_1210	0.22	+2.2
1,313,946	-		Psest_1210	0.22	+0.2
1,313,946	-		Psest_1210	0.22	+1.1
1,313,946	-		Psest_1210	0.22	+0.5
1,313,946	-		Psest_1210	0.22	+2.2
1,313,946	-		Psest_1210	0.22	-0.2
1,313,978	+		Psest_1210	0.23	+0.2
1,313,978	+		Psest_1210	0.23	-1.1
1,313,978	+		Psest_1210	0.23	+0.8
1,313,981	+		Psest_1210	0.23	+0.3
1,313,981	+		Psest_1210	0.23	+0.9
1,313,981	+		Psest_1210	0.23	+0.8
1,313,981	+		Psest_1210	0.23	+2.5
1,313,982	-		Psest_1210	0.23	+1.5
1,313,982	-		Psest_1210	0.23	-1.8
1,313,999	+		Psest_1210	0.24	+1.8
1,314,035	+		Psest_1210	0.26	+1.2
1,314,035	+		Psest_1210	0.26	+1.5
1,314,036	-		Psest_1210	0.26	+0.8
1,314,036	-		Psest_1210	0.26	-0.0
1,314,068	+		Psest_1210	0.27	-1.8
1,314,069	-		Psest_1210	0.27	-0.8
1,314,069	-		Psest_1210	0.27	+0.2
1,314,069	-		Psest_1210	0.27	-1.6
1,314,324	+		Psest_1210	0.38	-1.8
1,314,324	+		Psest_1210	0.38	+0.4
1,314,534	+		Psest_1210	0.47	+0.2
1,314,587	+		Psest_1210	0.49	+0.5
1,314,587	+		Psest_1210	0.49	+0.6
1,314,588	-		Psest_1210	0.49	-0.7
1,314,590	+		Psest_1210	0.49	-0.1
1,314,590	+		Psest_1210	0.49	+1.6
1,314,590	+		Psest_1210	0.49	-1.5
1,314,591	-		Psest_1210	0.49	-1.4
1,314,620	+		Psest_1210	0.50	+0.5
1,314,620	+		Psest_1210	0.50	+0.2
1,314,623	+		Psest_1210	0.50	+1.2
1,314,623	+		Psest_1210	0.50	+1.2
1,314,624	-		Psest_1210	0.50	+0.2
1,314,791	+		Psest_1210	0.57	-1.1
1,314,791	+		Psest_1210	0.57	+0.9
1,314,791	+		Psest_1210	0.57	+0.9
1,314,791	+		Psest_1210	0.57	-0.4
1,314,791	+		Psest_1210	0.57	-0.0
1,314,791	+		Psest_1210	0.57	+1.0
1,314,792	-		Psest_1210	0.57	+1.6
1,314,794	+		Psest_1210	0.57	+0.6
1,314,794	+		Psest_1210	0.57	-1.8
1,314,794	+		Psest_1210	0.57	+1.2
1,314,916	+		Psest_1210	0.62	+2.2
1,314,916	+		Psest_1210	0.62	+0.8
1,314,916	+		Psest_1210	0.62	+0.2
1,314,916	+		Psest_1210	0.62	+1.1
1,314,917	-		Psest_1210	0.62	-2.1
1,314,923	+		Psest_1210	0.63	+0.2
1,314,923	+		Psest_1210	0.63	+1.2
1,314,933	-		Psest_1210	0.63	+0.5
1,314,933	-		Psest_1210	0.63	-0.5
1,314,933	-		Psest_1210	0.63	+1.2
1,315,172	+		Psest_1210	0.73	-1.6
1,315,173	-		Psest_1210	0.73	+1.2
1,315,229	+		Psest_1210	0.76	+1.2
1,315,392	-		Psest_1210	0.82	+0.1
1,315,472	+		Psest_1210	0.86	+1.2
1,315,472	+		Psest_1210	0.86	-0.9
1,315,472	+		Psest_1210	0.86	+1.2
1,315,473	-		Psest_1210	0.86	+0.1
1,315,473	-		Psest_1210	0.86	+0.2
1,315,583	+				-0.1
1,315,643	+				+0.9
1,315,643	+				-0.8
1,315,643	+				+1.2
1,315,643	+				+1.2
1,315,643	+				-0.4
1,315,643	+				+0.9
1,315,643	+				-1.4
1,315,643	+				-0.1
1,315,643	+				+0.6
1,315,643	+				+2.8
1,315,643	+				+0.2
1,315,643	+				-0.4
1,315,643	+				+1.2
1,315,643	+				-0.6
1,315,643	+				+0.2
1,315,644	-				+1.2
1,315,644	-				+1.2
1,315,644	-				+1.2
1,315,644	-				-0.8
1,315,644	-				-1.7
1,315,644	-				-0.1
1,315,644	-				+0.3
1,315,644	-				-1.6
1,315,644	-				-0.1
1,315,644	-				-0.8
1,315,644	-				+0.5
1,315,644	-				+0.4
1,315,647	+				+2.5
1,315,647	+				+0.6
1,315,647	+				+0.3
1,315,647	+				-1.8
1,315,647	+				+1.2
1,315,647	+				-0.4
1,315,648	-				+2.8
1,315,648	-				-0.4
1,315,648	-				+1.2
1,315,685	+				+0.2
1,315,685	+				-0.1
1,315,685	+				-0.6
1,315,685	+				-1.4
1,315,685	+				+3.2
1,315,686	-				-1.1
1,315,686	-				+0.8
1,315,686	-				+0.5
1,315,686	-				-0.1
1,315,686	-				-1.6
1,315,686	-				-0.5
1,315,742	-				+0.6
1,315,801	+				+1.8
1,315,801	+				-0.1
1,315,802	-				+1.5
1,315,810	-				-1.7
1,315,810	-				+1.2
1,315,815	+				+0.2
1,315,815	+				+2.2
1,315,815	+				-0.4
1,315,815	+				+3.2
1,315,815	+				+1.2
1,315,815	+				-0.4
1,315,815	+				+1.2
1,315,816	-				+1.2
1,316,119	+		Psest_1211	0.21	+0.2
1,316,120	-		Psest_1211	0.22	+3.8
1,316,148	+		Psest_1211	0.23	-1.0
1,316,148	+		Psest_1211	0.23	-0.4
1,316,149	-		Psest_1211	0.24	-0.8
1,316,232	+		Psest_1211	0.29	+0.2
1,316,232	+		Psest_1211	0.29	-1.1
1,316,233	-		Psest_1211	0.29	-1.6
1,316,233	-		Psest_1211	0.29	+0.2
1,316,245	-		Psest_1211	0.30	-1.4
1,316,245	-		Psest_1211	0.30	+0.7
1,316,245	-		Psest_1211	0.30	-2.0
1,316,448	+		Psest_1211	0.44	-1.1
1,316,535	+		Psest_1211	0.50	+0.2
1,316,535	+		Psest_1211	0.50	-0.2
1,316,535	+		Psest_1211	0.50	+2.2
1,316,535	+		Psest_1211	0.50	-1.8
1,316,535	+		Psest_1211	0.50	+0.6
1,316,536	-		Psest_1211	0.50	+2.2
1,316,536	-		Psest_1211	0.50	+1.8
1,316,536	-		Psest_1211	0.50	+1.2
1,316,544	-		Psest_1211	0.51	+1.8
1,316,628	+		Psest_1211	0.57	+1.6
1,316,628	+		Psest_1211	0.57	-0.1
1,316,628	+		Psest_1211	0.57	-0.4
1,316,628	+		Psest_1211	0.57	-0.0
1,316,628	+		Psest_1211	0.57	+0.8
1,316,628	+		Psest_1211	0.57	+0.2
1,316,628	+		Psest_1211	0.57	+0.2
1,316,629	-		Psest_1211	0.57	+0.6
1,316,629	-		Psest_1211	0.57	+2.2
1,316,629	-		Psest_1211	0.57	+1.8
1,316,629	-		Psest_1211	0.57	+1.2
1,316,629	-		Psest_1211	0.57	+0.6