Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1120

Experiment: Gentamicin 0.0016 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.0016 mg/ml
1,212,745	+		Psest_1119	0.29	+0.2
1,212,745	+		Psest_1119	0.29	-0.8
1,212,745	+		Psest_1119	0.29	-2.4
1,212,745	+		Psest_1119	0.29	-0.3
1,212,746	-		Psest_1119	0.29	-2.4
1,212,746	-		Psest_1119	0.29	-0.4
1,212,746	-		Psest_1119	0.29	+0.4
1,212,746	-		Psest_1119	0.29	-0.5
1,212,746	-		Psest_1119	0.29	-1.7
1,212,746	-		Psest_1119	0.29	-2.1
1,212,746	-		Psest_1119	0.29	+0.3
1,212,877	+		Psest_1119	0.39	-0.8
1,212,877	+		Psest_1119	0.39	-1.8
1,212,877	+		Psest_1119	0.39	-1.1
1,212,877	+		Psest_1119	0.39	+0.7
1,212,878	-		Psest_1119	0.39	-1.4
1,212,878	-		Psest_1119	0.39	+0.8
1,212,878	-		Psest_1119	0.39	-0.7
1,212,878	-		Psest_1119	0.39	-3.7
1,212,878	-		Psest_1119	0.39	+0.0
1,212,998	+		Psest_1119	0.49	-1.5
1,213,142	+		Psest_1119	0.60	-2.3
1,213,143	-		Psest_1119	0.60	-0.3
1,213,354	+		Psest_1119	0.77	-0.1
1,213,354	+		Psest_1119	0.77	-1.2
1,213,354	+		Psest_1119	0.77	-1.3
1,213,354	+		Psest_1119	0.77	-0.8
1,213,354	+		Psest_1119	0.77	-0.2
1,213,355	-		Psest_1119	0.77	-0.2
1,213,355	-		Psest_1119	0.77	-0.6
1,213,355	-		Psest_1119	0.77	-0.2
1,213,355	-		Psest_1119	0.77	-0.6
1,213,355	-		Psest_1119	0.77	-2.1
1,213,355	-		Psest_1119	0.77	-1.2
1,213,355	-		Psest_1119	0.77	-1.1
1,213,355	-		Psest_1119	0.77	-1.1
1,213,355	-		Psest_1119	0.77	-2.4
1,213,355	-		Psest_1119	0.77	-2.0
1,213,355	-		Psest_1119	0.77	-0.2
1,213,355	-		Psest_1119	0.77	-2.1
1,213,478	+		Psest_1119	0.87	-0.9
1,213,478	+		Psest_1119	0.87	-2.1
1,213,479	-		Psest_1119	0.87	-0.3
1,213,479	-		Psest_1119	0.87	+0.3
1,213,479	-		Psest_1119	0.87	+0.6
1,213,584	+				-1.6
1,213,707	+		Psest_1120	0.10	-1.3
1,213,850	-		Psest_1120	0.32	-0.9
1,213,944	+		Psest_1120	0.47	-0.7
1,213,945	-		Psest_1120	0.47	-1.1
1,213,945	-		Psest_1120	0.47	-0.6
1,214,128	-		Psest_1120	0.76	-0.6
1,214,160	+		Psest_1120	0.81	-2.4
1,214,160	+		Psest_1120	0.81	-2.6
1,214,161	-		Psest_1120	0.81	-1.1
1,214,161	-		Psest_1120	0.81	+1.6
1,214,161	-		Psest_1120	0.81	-1.1
1,214,161	-		Psest_1120	0.81	-4.1
1,214,161	-		Psest_1120	0.81	-1.3
1,214,161	-		Psest_1120	0.81	-2.1
1,214,302	+				-3.3
1,214,313	-				-2.1
1,214,391	-				-0.2
1,214,391	-				+0.1
1,214,501	-				-0.0
1,214,585	+				-0.4
1,214,585	+				+1.7
1,214,601	+		Psest_1121	0.13	-0.2
1,214,601	+		Psest_1121	0.13	-0.2
1,214,601	+		Psest_1121	0.13	-0.3
1,214,601	+		Psest_1121	0.13	+0.1
1,214,602	-		Psest_1121	0.13	+1.5
1,214,602	-		Psest_1121	0.13	-1.5
1,214,602	-		Psest_1121	0.13	-0.6
1,214,602	-		Psest_1121	0.13	+0.2
1,214,745	-		Psest_1121	0.38	-0.1
1,214,984	+		Psest_1121	0.81	+0.7
1,214,984	+		Psest_1121	0.81	+1.3
1,214,984	+		Psest_1121	0.81	+0.8
1,214,984	+		Psest_1121	0.81	+1.0
1,214,984	+		Psest_1121	0.81	-0.4
1,214,984	+		Psest_1121	0.81	+1.9
1,214,984	+		Psest_1121	0.81	+1.8
1,214,984	+		Psest_1121	0.81	+1.1
1,214,985	-		Psest_1121	0.81	-0.2
1,214,985	-		Psest_1121	0.81	-0.6
1,214,985	-		Psest_1121	0.81	-1.6
1,214,985	-		Psest_1121	0.81	-0.9
1,214,985	-		Psest_1121	0.81	-1.4
1,214,985	-		Psest_1121	0.81	+0.7
1,214,985	-		Psest_1121	0.81	+0.1
1,215,011	+		Psest_1121	0.86	-0.3
1,215,035	+				+2.3
1,215,035	+				+1.5
1,215,035	+				-0.1
1,215,035	+				+0.5
1,215,036	-				-1.4
1,215,036	-				-2.5
1,215,036	-				-0.9
1,215,036	-				+0.2
1,215,036	-				-0.8
1,215,036	-				+0.7
1,215,036	-				-0.5
1,215,036	-				-0.5
1,215,036	-				-1.4
1,215,036	-				+0.8
1,215,036	-				-1.8
1,215,036	-				+0.0
1,215,069	-				-0.5
1,215,069	-				-2.6
1,215,237	+				-1.0
1,215,238	-				-1.4