Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1055

Experiment: Gentamicin 0.0016 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.0016 mg/ml
1,142,956	-		Psest_1054	0.35	-1.4
1,143,245	-		Psest_1054	0.61	-0.1
1,143,322	-		Psest_1054	0.68	+1.7
1,143,433	-		Psest_1054	0.79	+1.5
1,143,433	-		Psest_1054	0.79	+1.8
1,143,433	-		Psest_1054	0.79	+1.5
1,143,433	-		Psest_1054	0.79	-0.8
1,143,433	-		Psest_1054	0.79	+1.0
1,143,433	-		Psest_1054	0.79	+1.1
1,143,433	-		Psest_1054	0.79	+0.2
1,143,433	-		Psest_1054	0.79	-0.2
1,143,481	-		Psest_1054	0.83	+3.5
1,143,649	-				-0.1
1,143,649	-				+0.1
1,143,677	+				-1.1
1,143,678	-				+1.6
1,143,712	+				+0.4
1,143,712	+				+2.2
1,143,712	+				-1.4
1,143,712	+				+0.8
1,143,712	+				+1.4
1,143,712	+				+0.4
1,143,712	+				+2.5
1,143,713	-				+0.3
1,143,713	-				+1.1
1,143,751	+				-0.2
1,143,751	+				+0.2
1,143,751	+				-0.4
1,143,751	+				-0.3
1,143,752	-				+2.1
1,143,752	-				+1.8
1,143,790	+				+0.3
1,143,881	+		Psest_1055	0.12	+1.5
1,143,882	-		Psest_1055	0.12	+0.0
1,143,882	-		Psest_1055	0.12	+1.6
1,143,976	+		Psest_1055	0.20	+0.4
1,143,976	+		Psest_1055	0.20	+1.2
1,143,977	-		Psest_1055	0.20	+0.5
1,143,977	-		Psest_1055	0.20	+2.2
1,143,977	-		Psest_1055	0.20	+1.8
1,143,977	-		Psest_1055	0.20	-0.4
1,144,074	-		Psest_1055	0.28	+1.2
1,144,082	+		Psest_1055	0.29	+1.2
1,144,082	-		Psest_1055	0.29	+1.1
1,144,083	-		Psest_1055	0.29	-0.0
1,144,083	-		Psest_1055	0.29	+1.2
1,144,194	-		Psest_1055	0.38	-0.4
1,144,194	-		Psest_1055	0.38	+1.5
1,144,194	-		Psest_1055	0.38	+0.9
1,144,194	-		Psest_1055	0.38	+1.1
1,144,253	+		Psest_1055	0.43	+1.2
1,144,253	+		Psest_1055	0.43	-0.2
1,144,254	-		Psest_1055	0.43	+1.4
1,144,254	-		Psest_1055	0.43	+1.2
1,144,254	-		Psest_1055	0.43	+1.1
1,144,254	-		Psest_1055	0.43	+1.2
1,144,310	+		Psest_1055	0.48	+2.2
1,144,310	+		Psest_1055	0.48	+1.5
1,144,400	+		Psest_1055	0.55	+2.3
1,144,400	+		Psest_1055	0.55	+1.8
1,144,450	-		Psest_1055	0.59	-1.8
1,144,450	-		Psest_1055	0.59	+3.2
1,144,487	+		Psest_1055	0.62	+2.1
1,144,487	+		Psest_1055	0.62	+3.4
1,144,487	+		Psest_1055	0.62	+3.5
1,144,487	+		Psest_1055	0.62	+0.2
1,144,488	-		Psest_1055	0.62	+1.2
1,144,488	-		Psest_1055	0.62	+1.8
1,144,488	-		Psest_1055	0.62	+1.2
1,144,488	-		Psest_1055	0.62	-0.6
1,144,488	-		Psest_1055	0.62	+1.6
1,144,488	-		Psest_1055	0.62	+0.6
1,144,488	-		Psest_1055	0.62	+0.8
1,144,488	-		Psest_1055	0.62	+0.8
1,144,501	+		Psest_1055	0.64	+2.2
1,144,502	-		Psest_1055	0.64	+0.9
1,144,625	+		Psest_1055	0.74	+2.7
1,144,626	-		Psest_1055	0.74	+0.9
1,144,697	+		Psest_1055	0.80	+2.4
1,144,697	+		Psest_1055	0.80	+3.0
1,144,698	-		Psest_1055	0.80	+1.4
1,144,698	-		Psest_1055	0.80	+0.6
1,144,698	-		Psest_1055	0.80	+1.2
1,144,724	+		Psest_1055	0.82	+0.8
1,144,754	+		Psest_1055	0.85	+2.8
1,144,754	+		Psest_1055	0.85	+2.1
1,144,755	-		Psest_1055	0.85	+1.0
1,144,767	+		Psest_1055	0.86	+2.2
1,144,988	+				+0.2
1,144,996	+				+0.1
1,144,997	-				+0.8
1,144,997	-				+1.5
1,144,997	-				+0.4
1,144,997	-				-0.1
1,145,036	+				+0.7
1,145,037	-				+1.2
1,145,241	+				-1.6
1,145,242	-				+0.7
1,145,284	+				+1.8
1,145,615	+		Psest_1056	0.21	+0.8
1,145,615	+		Psest_1056	0.21	-1.5
1,145,828	+		Psest_1056	0.35	-0.2