Strain Fitness in Shewanella oneidensis MR-1 around SO2241

Experiment: Tetracycline 0.0004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.0004 mg/ml
2,356,942	-		SO2240	0.69	-0.7
2,357,186	-		SO2240	0.83	+0.1
2,357,196	+		SO2240	0.84	-0.1
2,357,264	-		SO2240	0.88	+0.9
2,357,299	-				+0.2
2,357,391	-				+0.7
2,357,493	-				+0.0
2,357,580	-				+1.4
2,357,592	-				+0.4
2,357,603	-				+0.0
2,357,648	-				+0.9
2,357,865	-				+1.1
2,357,868	+				+0.7
2,357,868	+				+0.1
2,357,873	+				+0.6
2,357,876	-		SO2241	0.10	+1.0
2,357,900	-		SO2241	0.13	+0.3
2,357,933	-		SO2241	0.18	+0.8
2,357,944	-		SO2241	0.19	+0.3
2,357,950	-		SO2241	0.20	-1.5
2,358,047	+		SO2241	0.34	+0.5
2,358,055	-		SO2241	0.35	+2.0
2,358,096	-		SO2241	0.40	+0.6
2,358,266	-		SO2241	0.64	+0.0
2,358,617	-				+0.6
2,358,623	+				+1.1
2,359,195	-				+0.9
2,359,222	+				-0.0
2,359,289	+		SO2244	0.15	+1.6
2,359,350	+		SO2244	0.20	+0.4
2,359,378	-		SO2244	0.23	+1.0