Strain Fitness in Shewanella oneidensis MR-1 around SO2223

Experiment: Tetracycline 0.0004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.0004 mg/ml
2,338,853	+				+0.1
2,338,888	+				+0.9
2,338,888	+				+0.5
2,339,249	-		SO2223	0.22	+1.0
2,339,275	+		SO2223	0.23	+0.8
2,339,290	-		SO2223	0.24	+0.3
2,339,290	-		SO2223	0.24	+0.4
2,339,415	+		SO2223	0.30	-1.3
2,339,424	+		SO2223	0.30	+0.8
2,339,770	+		SO2223	0.47	-0.2
2,339,832	+		SO2223	0.50	+0.5
2,339,939	-		SO2223	0.55	+0.8
2,340,201	-		SO2223	0.68	+0.4
2,340,261	-		SO2223	0.71	-0.5
2,340,322	-		SO2223	0.74	+0.8
2,340,389	+		SO2223	0.77	+0.2
2,340,442	-		SO2223	0.79	+0.1
2,340,540	+		SO2223	0.84	+0.8
2,340,601	+		SO2223	0.87	-0.1
2,340,632	-		SO2223	0.89	+0.6
2,340,677	-				-0.0
2,340,707	+				+1.5
2,340,707	+				-1.0
2,340,729	+				+0.9
2,340,747	-				+0.5
2,340,812	+				+0.3
2,340,910	-				+0.4
2,341,415	-		SO2224	0.83	+0.4
2,341,690	-		SO2225	0.15	+0.7
2,341,697	+		SO2225	0.16	+1.1
2,341,714	+		SO2225	0.18	-0.7
2,341,717	-		SO2225	0.18	+0.6
2,341,793	+		SO2225	0.26	+0.2
2,341,801	-		SO2225	0.27	+0.5
2,341,819	+		SO2225	0.29	-0.3
2,341,852	+		SO2225	0.33	+0.8