Strain Fitness in Shewanella oneidensis MR-1 around SO2950

Experiment: Chloramphenicol 0.0004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 0.0004 mg/ml
3,086,372	+		SO2948	0.74	+0.0
3,086,615	+				-0.3
3,086,638	-				+0.4
3,086,647	+				-0.1
3,086,706	+		SO2949	0.13	-0.2
3,086,709	-		SO2949	0.13	-0.3
3,086,715	-		SO2949	0.14	-0.4
3,086,720	-		SO2949	0.15	-1.4
3,086,810	-		SO2949	0.27	+0.2
3,086,876	-		SO2949	0.37	-0.7
3,086,893	-		SO2949	0.39	+1.0
3,087,008	+		SO2949	0.55	-0.3
3,087,019	+		SO2949	0.56	+0.8
3,087,128	-		SO2949	0.71	+0.1
3,087,128	-		SO2949	0.71	-0.0
3,087,138	+		SO2949	0.73	-1.3
3,087,149	+		SO2949	0.74	-0.2
3,087,162	-		SO2949	0.76	-0.9
3,087,306	+				+0.2
3,087,306	+				-0.4
3,087,306	+				-0.1
3,087,306	+				-0.4
3,087,306	+				-0.7
3,087,314	-				-0.5
3,087,314	-				+0.2
3,087,376	+				-0.3
3,087,376	+				-0.5
3,087,383	+				+0.3
3,087,384	-				-0.5
3,087,384	-				-0.2
3,087,384	-				+0.2
3,087,384	-				-0.1
3,087,477	-		SO2950	0.22	-0.7
3,087,477	-		SO2950	0.22	-0.1
3,087,590	+		SO2950	0.40	-0.5
3,087,674	-		SO2950	0.52	-0.4
3,087,674	-		SO2950	0.52	-0.0
3,087,674	-		SO2950	0.52	-0.1
3,087,674	-		SO2950	0.52	-0.4
3,087,689	-		SO2950	0.55	+0.1
3,087,765	+		SO2950	0.66	-0.7
3,087,771	+		SO2950	0.67	-0.5
3,087,883	+		SO2950	0.84	+0.4
3,087,891	-		SO2950	0.85	+0.2
3,087,895	+		SO2950	0.86	-0.7
3,087,895	-		SO2950	0.86	-0.1
3,087,903	+		SO2950	0.87	-0.2
3,087,910	+		SO2950	0.88	-0.0
3,087,911	-		SO2950	0.88	-0.2
3,087,950	+				+0.3
3,088,064	-				-0.1
3,088,166	-				-0.6
3,088,173	+				-0.6
3,088,181	-				-0.5
3,088,190	-				-0.1
3,088,200	+				+0.3
3,088,244	-		SO2951	0.12	+0.0
3,088,251	+		SO2951	0.12	-0.1
3,088,251	+		SO2951	0.12	-0.6
3,088,279	+		SO2951	0.14	-0.1
3,088,415	-		SO2951	0.20	-0.2
3,088,437	-		SO2951	0.21	-0.5
3,088,437	-		SO2951	0.21	+0.6
3,088,442	-		SO2951	0.21	+0.4
3,088,510	-		SO2951	0.25	-0.2
3,088,512	+		SO2951	0.25	-0.4
3,088,578	-		SO2951	0.28	-0.1
3,088,597	+		SO2951	0.29	-0.1
3,088,600	+		SO2951	0.29	-0.3
3,088,600	+		SO2951	0.29	-0.3
3,088,602	+		SO2951	0.29	-0.6
3,088,602	+		SO2951	0.29	-0.3
3,088,602	+		SO2951	0.29	-0.6
3,088,605	-		SO2951	0.29	-0.2
3,088,605	-		SO2951	0.29	+2.4
3,088,608	-		SO2951	0.29	-0.8
3,088,610	-		SO2951	0.29	+0.3
3,088,610	-		SO2951	0.29	+0.5
3,088,647	-		SO2951	0.31	+0.3
3,088,708	-		SO2951	0.34	-0.4
3,088,760	+		SO2951	0.36	+0.8
3,088,773	-		SO2951	0.37	-0.7
3,088,796	+		SO2951	0.38	-0.1
3,088,815	+		SO2951	0.39	-0.5
3,088,825	+		SO2951	0.39	+0.5
3,088,825	+		SO2951	0.39	-0.5
3,088,860	-		SO2951	0.41	-0.2
3,088,863	+		SO2951	0.41	-0.3
3,088,871	-		SO2951	0.42	+0.2