Strain Fitness in Shewanella oneidensis MR-1 around SO_2784

Experiment: Chloramphenicol 0.0004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 0.0004 mg/ml
2,903,545	+				-0.3
2,903,630	+				-1.5
2,903,666	-				-0.3
2,903,751	+				-0.5
2,903,776	-		SO_2783	0.12	-0.3
2,903,926	-		SO_2783	0.46	+0.8
2,904,120	+				-0.9
2,904,183	-				+0.0
2,904,183	-				-1.1
2,904,213	+				-0.2
2,904,280	+				+0.6
2,904,346	-				+0.3
2,904,410	+				-0.2
2,904,448	-				+1.6
2,904,450	+				-1.1
2,904,450	+				+0.7
2,904,450	+				-1.2
2,904,460	-				-0.2
2,904,483	-				+0.5
2,904,506	-				-0.2
2,904,575	-				-1.1
2,904,643	+		SO_2784	0.13	-1.7
2,904,643	+		SO_2784	0.13	-1.3
2,904,651	-		SO_2784	0.14	-0.5
2,904,651	-		SO_2784	0.14	-0.1
2,904,706	-		SO_2784	0.20	-2.1
2,904,772	-		SO_2784	0.27	-1.6
2,904,870	-		SO_2784	0.37	-2.2
2,904,905	-		SO_2784	0.41	-2.4
2,904,905	-		SO_2784	0.41	-0.1
2,904,905	-		SO_2784	0.41	-0.7
2,904,905	-		SO_2784	0.41	-0.5
2,904,910	-		SO_2784	0.41	-1.2
2,904,926	+		SO_2784	0.43	-0.2
2,904,931	+		SO_2784	0.43	-1.6
2,904,978	-		SO_2784	0.48	-1.3
2,905,080	-		SO_2784	0.59	-1.6
2,905,235	+		SO_2784	0.75	-1.5
2,905,374	+		SO_2784	0.89	-1.5
2,905,382	-				-1.4
2,905,382	-				-0.6
2,905,419	-				-1.2
2,905,447	+				-0.9
2,905,512	-				-0.9
2,905,512	-				-1.5