Strain Fitness in Shewanella oneidensis MR-1 around SO3503

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,652,599	+				-0.1
3,652,607	-				-0.4
3,652,745	+		SO3502	0.18	+0.2
3,652,758	+		SO3502	0.19	+0.5
3,652,799	+		SO3502	0.24	+0.2
3,652,799	+		SO3502	0.24	-0.1
3,652,805	-		SO3502	0.25	-0.4
3,652,805	-		SO3502	0.25	+0.4
3,652,877	+		SO3502	0.33	-0.2
3,652,877	+		SO3502	0.33	+0.2
3,652,877	+		SO3502	0.33	+0.1
3,652,877	+		SO3502	0.33	-0.2
3,652,877	+		SO3502	0.33	+0.2
3,652,885	-		SO3502	0.34	+0.4
3,652,885	-		SO3502	0.34	+0.4
3,652,923	+		SO3502	0.39	+0.4
3,652,923	+		SO3502	0.39	+0.4
3,652,931	-		SO3502	0.40	+0.4
3,652,931	-		SO3502	0.40	-0.7
3,652,958	+		SO3502	0.43	+0.1
3,652,966	-		SO3502	0.44	-0.6
3,652,995	-		SO3502	0.47	+0.2
3,653,005	-		SO3502	0.49	-1.7
3,653,058	+		SO3502	0.55	+0.2
3,653,126	+		SO3502	0.63	+0.2
3,653,126	+		SO3502	0.63	+0.4
3,653,159	+		SO3502	0.67	+0.2
3,653,354	+				-0.1
3,653,354	+				-0.2
3,653,379	+				+0.3
3,653,581	+				-0.3
3,653,588	+				+0.7
3,653,729	-		SO3503	0.13	+0.0
3,653,815	-		SO3503	0.20	-0.2
3,653,838	-		SO3503	0.21	+0.6
3,653,848	+		SO3503	0.22	+0.0
3,653,925	+		SO3503	0.28	-1.2
3,654,047	-		SO3503	0.37	+0.1
3,654,112	+		SO3503	0.42	+0.7
3,654,167	-		SO3503	0.47	+0.4
3,654,293	+		SO3503	0.56	+0.0
3,654,293	+		SO3503	0.56	+1.1
3,654,293	+		SO3503	0.56	+0.4
3,654,299	+		SO3503	0.57	-0.2
3,654,307	-		SO3503	0.57	+0.4
3,654,358	+		SO3503	0.61	-0.2
3,654,358	+		SO3503	0.61	-0.0
3,654,358	+		SO3503	0.61	+0.4
3,654,358	+		SO3503	0.61	+0.5
3,654,366	-		SO3503	0.62	-0.0
3,654,366	-		SO3503	0.62	+0.1
3,654,366	-		SO3503	0.62	-0.2
3,654,435	+		SO3503	0.67	+0.3
3,654,480	+		SO3503	0.70	+0.9
3,654,480	+		SO3503	0.70	-0.5
3,654,480	-		SO3503	0.70	+1.1
3,654,481	+		SO3503	0.71	+1.3
3,654,488	-		SO3503	0.71	+0.3
3,654,540	+		SO3503	0.75	-0.1
3,654,614	+		SO3503	0.81	+0.7
3,654,622	-		SO3503	0.81	+0.8
3,654,660	+		SO3503	0.84	+0.4
3,654,662	-		SO3503	0.84	-0.0
3,654,894	+				+1.1
3,654,928	+				-0.7
3,654,928	+				+0.4
3,654,928	+				+0.0
3,654,936	-				+0.5
3,654,936	-				+0.7
3,654,936	-				+0.6
3,654,936	-				-0.3
3,654,936	-				+0.6
3,654,936	-				+0.1
3,654,936	-				+0.0
3,654,936	-				-0.3
3,654,972	-				+0.9
3,654,972	-				-0.4
3,655,237	+				+0.6
3,655,237	+				-0.2
3,655,245	-				-0.5
3,655,247	+				+0.1
3,655,293	-				+0.0
3,655,364	+		SO3504	0.13	-1.1
3,655,440	-		SO3504	0.20	-0.2
3,655,442	-		SO3504	0.20	+0.2
3,655,461	-		SO3504	0.21	+0.1
3,655,461	-		SO3504	0.21	-0.2
3,655,487	-		SO3504	0.24	-0.0
3,655,492	-		SO3504	0.24	-0.3
3,655,557	+		SO3504	0.30	+0.0
3,655,565	-		SO3504	0.30	+0.2
3,655,600	+		SO3504	0.33	-0.2
3,655,608	-		SO3504	0.34	+0.7
3,655,642	-		SO3504	0.37	+0.2
3,655,674	-		SO3504	0.39	-0.3
3,655,708	-		SO3504	0.42	+0.1
3,655,794	+		SO3504	0.49	+0.0
3,655,821	+		SO3504	0.52	-0.9