Strain Fitness in Shewanella oneidensis MR-1 around SO2009

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,106,385	+				-0.2
2,106,453	+				-0.1
2,106,495	-				+0.4
2,106,495	-				+0.8
2,106,519	+				-0.1
2,106,527	-				+0.1
2,106,712	+		SO2008	0.26	+0.0
2,106,841	+		SO2008	0.41	-0.4
2,106,875	-		SO2008	0.45	+1.5
2,106,947	-		SO2008	0.54	-0.9
2,106,983	-		SO2008	0.58	+0.7
2,107,032	+		SO2008	0.64	+0.2
2,107,189	-		SO2008	0.82	+0.3
2,107,225	+		SO2008	0.87	-0.2
2,107,311	-				+0.9
2,107,311	-				+1.1
2,107,354	+				+0.2
2,107,405	+				-0.7
2,107,436	-		SO2009	0.13	+0.2
2,107,489	+		SO2009	0.21	+1.8
2,107,505	-		SO2009	0.23	+0.3
2,107,505	-		SO2009	0.23	-0.1
2,107,507	+				+0.3
2,107,507	+		SO2009	0.23	-1.0
2,107,641	-		SO2009	0.41	-0.8
2,107,766	-		SO2009	0.58	-0.1
2,107,831	-		SO2009	0.67	-0.1
2,107,831	-		SO2009	0.67	+0.6
2,107,831	-		SO2009	0.67	-0.0
2,108,014	+				+0.0
2,108,050	+				-0.3
2,108,071	+				+0.5
2,108,079	-				+0.3
2,108,079	-				-1.0
2,108,079	-				+0.1
2,108,079	-				+0.4
2,108,086	-				+0.3
2,108,292	+		SO2010	0.44	+0.7
2,108,396	-				+0.9
2,108,398	+				-0.7
2,108,509	+		SO2011	0.13	+0.1
2,108,509	+		SO2011	0.13	-1.6
2,108,509	+		SO2011	0.13	+0.3
2,108,532	-		SO2011	0.20	-0.3
2,108,540	+		SO2011	0.22	-0.5
2,108,716	+		SO2011	0.69	-0.1
2,108,841	-				+0.5
2,108,982	-				-0.3