Strain Fitness in Shewanella amazonensis SB2B around Sama_3204

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,793,971	+				-0.5
3,793,971	+				-0.6
3,794,041	+		Sama_3203	0.15	-0.5
3,794,041	+		Sama_3203	0.15	-0.3
3,794,185	+		Sama_3203	0.38	-1.7
3,794,220	+		Sama_3203	0.44	-1.6
3,794,255	+		Sama_3203	0.50	-2.2
3,794,255	+		Sama_3203	0.50	+0.0
3,794,543	+				+0.1
3,796,219	+				+0.3
3,796,223	+				-0.9
3,796,224	-				-0.6
3,796,237	+				-1.1
3,796,240	+				-0.2
3,796,240	+				-2.2
3,796,240	+				-0.6
3,796,241	-				-1.7
3,796,282	+				-0.2
3,796,283	-				-2.3
3,796,288	+				-1.4
3,796,289	-				-1.4
3,796,289	-				-0.6
3,796,289	-				-2.3
3,796,505	+				-2.6
3,796,513	+				-1.6
3,796,513	+				-1.2
3,796,514	-				-1.7
3,796,534	+				-2.1
3,796,535	-				-1.6
3,796,535	-				-1.4
3,796,560	+		Sama_3206	0.12	-0.6
3,796,560	+		Sama_3206	0.12	-1.4
3,796,591	-		Sama_3206	0.20	-1.4
3,796,802	+		Sama_3206	0.76	-1.2
3,796,802	+		Sama_3206	0.76	-0.9
3,796,876	+				+1.1
3,796,889	+				-1.4
3,796,889	+				-2.3
3,796,889	+				-0.9
3,796,889	+				+0.4
3,796,947	+				-2.4
3,796,948	-				-0.6
3,796,960	+				-0.9
3,796,960	+				-0.4
3,796,980	+		Sama_3207	0.11	-0.9
3,796,981	-		Sama_3207	0.11	-2.4
3,796,984	+		Sama_3207	0.12	-0.6
3,796,984	+		Sama_3207	0.12	-1.2
3,796,984	+		Sama_3207	0.12	-0.9
3,796,984	+		Sama_3207	0.12	-1.6
3,796,985	-		Sama_3207	0.12	-2.2
3,797,011	+		Sama_3207	0.15	-1.4
3,797,011	+		Sama_3207	0.15	-0.6
3,797,012	-		Sama_3207	0.16	-2.5
3,797,016	-		Sama_3207	0.16	-1.4
3,797,023	+		Sama_3207	0.17	-2.2
3,797,023	+		Sama_3207	0.17	-1.7
3,797,023	+		Sama_3207	0.17	-0.2
3,797,023	+		Sama_3207	0.17	-1.4
3,797,023	+		Sama_3207	0.17	-0.9
3,797,023	+		Sama_3207	0.17	-0.6
3,797,024	-		Sama_3207	0.17	-0.9
3,797,148	-		Sama_3207	0.34	+0.1
3,797,156	+		Sama_3207	0.35	-1.9
3,797,189	+		Sama_3207	0.39	-1.9