Strain Fitness in Shewanella amazonensis SB2B around Sama_1828

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,223,401	+		Sama_1826	0.78	-0.6
2,223,424	+		Sama_1826	0.81	-1.6
2,223,496	+				+0.1
2,223,496	+				-0.1
2,223,518	+				-0.1
2,223,518	+				-0.6
2,223,530	+				-1.3
2,223,589	+				-0.8
2,224,154	+				+0.1
2,224,187	-				+1.1
2,224,187	-				+0.7
2,224,190	+				-2.4
2,224,190	+				+0.7
2,224,190	+				+0.5
2,224,190	+				-0.4
2,224,191	-				-0.3
2,224,378	+				-0.4
2,224,378	+				-1.6
2,224,379	-				+0.5
2,224,379	-				+0.0
2,224,423	-				+0.7
2,224,427	-				+0.4
2,224,427	-				+0.7
2,224,427	-				-0.7
2,224,427	-				-1.1
2,224,486	+		Sama_1828	0.11	+0.6
2,224,486	+		Sama_1828	0.11	+1.2
2,224,487	-		Sama_1828	0.11	-1.6
2,224,487	-		Sama_1828	0.11	+1.7
2,224,611	+		Sama_1828	0.17	+0.0
2,224,612	-		Sama_1828	0.17	+0.2
2,224,615	-		Sama_1828	0.17	-0.1
2,224,781	-		Sama_1828	0.25	-0.3
2,224,787	-		Sama_1828	0.26	+0.2
2,224,787	-		Sama_1828	0.26	-1.3
2,224,787	-		Sama_1828	0.26	+0.6
2,224,870	-		Sama_1828	0.30	+1.9
2,224,978	+		Sama_1828	0.35	-0.7
2,224,979	-		Sama_1828	0.35	+0.9
2,224,979	-		Sama_1828	0.35	+1.2
2,225,009	-		Sama_1828	0.37	-0.8
2,225,048	-		Sama_1828	0.39	-0.7
2,225,087	+		Sama_1828	0.41	+0.1
2,225,088	-		Sama_1828	0.41	-0.9
2,225,088	-		Sama_1828	0.41	+0.3
2,225,193	-		Sama_1828	0.46	-2.3
2,225,193	-		Sama_1828	0.46	+0.2
2,225,231	+		Sama_1828	0.48	-2.6
2,225,231	+		Sama_1828	0.48	+1.7
2,225,231	+		Sama_1828	0.48	+1.3
2,225,231	+		Sama_1828	0.48	-0.0
2,225,231	+		Sama_1828	0.48	-0.1
2,225,231	+		Sama_1828	0.48	-0.8
2,225,232	-		Sama_1828	0.48	+0.9
2,225,232	-		Sama_1828	0.48	-0.4
2,225,232	-		Sama_1828	0.48	-0.4
2,225,232	-		Sama_1828	0.48	+0.4
2,225,232	-		Sama_1828	0.48	+0.0
2,225,232	-		Sama_1828	0.48	-0.3
2,225,232	-		Sama_1828	0.48	-0.8
2,225,232	-		Sama_1828	0.48	-0.3
2,225,276	-		Sama_1828	0.50	-0.3
2,225,301	-		Sama_1828	0.51	-0.6
2,225,348	+		Sama_1828	0.54	+0.7
2,225,409	-		Sama_1828	0.57	+0.2
2,225,427	+		Sama_1828	0.57	+0.2
2,225,493	+		Sama_1828	0.61	-0.3
2,225,494	-		Sama_1828	0.61	+0.1
2,225,494	-		Sama_1828	0.61	-1.1
2,225,537	+		Sama_1828	0.63	+0.2
2,225,537	+		Sama_1828	0.63	-0.5
2,225,680	-		Sama_1828	0.70	-0.7
2,225,741	+		Sama_1828	0.73	-1.1
2,225,741	+		Sama_1828	0.73	-0.7
2,225,742	-		Sama_1828	0.73	-0.5
2,225,764	+		Sama_1828	0.74	-1.3
2,225,764	+		Sama_1828	0.74	-2.1
2,225,765	-		Sama_1828	0.74	-0.2
2,225,765	-		Sama_1828	0.74	-0.6
2,225,765	-		Sama_1828	0.74	-0.3
2,225,765	-		Sama_1828	0.74	+2.0
2,225,820	+		Sama_1828	0.77	+3.6
2,225,821	-		Sama_1828	0.77	+1.2
2,225,822	+		Sama_1828	0.77	+0.3
2,225,823	-		Sama_1828	0.77	+0.4
2,225,823	-		Sama_1828	0.77	+1.2
2,225,823	-		Sama_1828	0.77	+0.2
2,225,823	-		Sama_1828	0.77	+1.2
2,225,823	-		Sama_1828	0.77	-0.3
2,225,847	-		Sama_1828	0.78	-0.1
2,225,847	-		Sama_1828	0.78	-0.0
2,225,847	-		Sama_1828	0.78	-0.8
2,225,893	+		Sama_1828	0.81	-0.6
2,225,893	+		Sama_1828	0.81	-0.4
2,225,965	-		Sama_1828	0.84	+0.4
2,225,982	-		Sama_1828	0.85	-0.7
2,225,982	-		Sama_1828	0.85	+0.2
2,225,982	-		Sama_1828	0.85	-0.8
2,225,997	-		Sama_1828	0.86	+0.3
2,225,999	+		Sama_1828	0.86	+0.3
2,226,000	-		Sama_1828	0.86	+1.0
2,226,000	-		Sama_1828	0.86	+0.2
2,226,000	-		Sama_1828	0.86	-0.7
2,226,005	+		Sama_1828	0.86	-0.6
2,226,006	-		Sama_1828	0.86	+0.4
2,226,008	+		Sama_1828	0.86	-0.1
2,226,009	-		Sama_1828	0.86	+0.2
2,226,009	-		Sama_1828	0.86	+1.0
2,226,020	+		Sama_1828	0.87	-0.4
2,226,062	+		Sama_1828	0.89	+0.5
2,226,085	-				+1.0
2,226,126	+				-1.6
2,226,126	+				-0.8
2,226,228	+				-1.1
2,226,229	-				-0.7
2,226,252	-				+0.7
2,226,305	-				+0.7
2,226,323	-				-0.7
2,226,376	-				-0.5
2,226,376	-				-0.3
2,226,379	+				+0.2
2,226,380	-				-0.9
2,226,407	+				+0.3
2,226,408	-				-1.6
2,226,408	-				+0.7
2,226,408	-				-0.5
2,226,408	-				-1.1
2,226,413	+				-1.2
2,226,434	+				+0.5
2,226,435	-				+0.0
2,226,435	-				-0.1
2,226,484	-				+0.2
2,226,484	-				+0.5
2,226,756	-				-0.1
2,226,772	+				-1.6
2,226,801	+				+0.2
2,226,801	+				+1.6
2,226,802	-				-1.3
2,226,808	-				-0.8
2,226,808	-				+0.4
2,226,810	+				-1.1
2,226,811	-				+0.1
2,226,811	-				+0.1
2,226,811	-				-0.3
2,226,811	-				+0.2
2,226,926	+				-1.8
2,226,926	+				-1.4
2,226,926	+				-0.4
2,226,926	+				-0.6
2,226,927	-				-1.2
2,226,927	-				+0.2
2,226,927	-				+2.1
2,226,947	-				-1.3
2,226,947	-				-1.6