Strain Fitness in Shewanella amazonensis SB2B around Sama_1292

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,578,657	-		Sama_1291	0.37	-0.1
1,578,920	+		Sama_1291	0.69	-1.9
1,578,921	-		Sama_1291	0.69	+1.2
1,579,165	+				-0.1
1,579,165	+				+0.2
1,579,166	-				+0.1
1,579,166	-				+0.3
1,579,166	-				+0.9
1,579,198	+				+0.2
1,579,198	+				+0.2
1,579,198	+				-0.5
1,579,199	-				-0.5
1,579,199	-				-0.1
1,579,199	-				+2.7
1,579,199	-				+0.9
1,579,206	+				-0.4
1,579,230	+				+0.4
1,579,231	-				-0.8
1,579,251	+				+0.2
1,579,252	-				-1.5
1,579,402	+				-0.6
1,579,402	+				-1.1
1,579,402	+				-2.1
1,579,453	+		Sama_1292	0.19	-1.3
1,579,484	+		Sama_1292	0.26	-0.8
1,579,484	+		Sama_1292	0.26	+0.4
1,579,586	+		Sama_1292	0.48	-0.9
1,579,651	+		Sama_1292	0.62	-1.1
1,579,651	+		Sama_1292	0.62	-0.1
1,579,651	+		Sama_1292	0.62	-0.1
1,579,651	+		Sama_1292	0.62	-1.1
1,579,732	+		Sama_1292	0.80	-1.4
1,579,772	+		Sama_1292	0.88	+0.2
1,579,772	+		Sama_1292	0.88	-1.9
1,579,772	+		Sama_1292	0.88	-0.9
1,579,772	+		Sama_1292	0.88	-0.1
1,579,797	+				-0.4