Strain Fitness in Shewanella oneidensis MR-1 around SO2735

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
2,851,088	+				+0.7
2,851,091	+				-0.1
2,851,104	+				-0.4
2,851,104	+				+0.4
2,851,104	+				+1.1
2,851,112	-				+0.6
2,851,112	-				+0.3
2,851,112	-				+0.3
2,851,122	+				+0.8
2,851,125	-				+0.6
2,851,130	-				-0.3
2,851,180	+				+0.5
2,851,366	+		SO2735	0.85	-1.5
2,851,366	+		SO2735	0.85	+0.8
2,851,366	+		SO2735	0.85	-0.6
2,851,366	+		SO2735	0.85	-0.4
2,851,366	+		SO2735	0.85	-0.2
2,851,366	+		SO2735	0.85	+0.2
2,851,366	+		SO2735	0.85	+0.9
2,851,366	+		SO2735	0.85	-0.3
2,851,366	+		SO2735	0.85	-0.2
2,851,366	+		SO2735	0.85	-1.5
2,851,366	+		SO2735	0.85	+0.2
2,851,366	+		SO2735	0.85	+0.7
2,851,366	+		SO2735	0.85	-0.2
2,851,366	+		SO2735	0.85	+0.3
2,851,366	+		SO2735	0.85	+0.5
2,851,366	+		SO2735	0.85	+0.4
2,851,366	+		SO2735	0.85	+0.3
2,851,366	+		SO2735	0.85	+0.1
2,851,366	+		SO2735	0.85	+0.3
2,851,366	+		SO2735	0.85	+0.7
2,851,366	+		SO2735	0.85	-0.3
2,851,366	+		SO2735	0.85	+0.5
2,851,366	+		SO2735	0.85	+0.6
2,851,366	+		SO2735	0.85	-0.7
2,851,366	+		SO2735	0.85	+0.5
2,851,366	+		SO2735	0.85	+0.2
2,851,366	+		SO2735	0.85	-0.4
2,851,366	+		SO2735	0.85	+0.2
2,851,366	+		SO2735	0.85	-0.1
2,851,366	+		SO2735	0.85	+0.4
2,851,366	+		SO2735	0.85	-1.4
2,851,367	+		SO2735	0.85	-0.0
2,851,367	+		SO2735	0.85	+0.2
2,851,367	+		SO2735	0.85	+0.2
2,851,372	+		SO2735	0.87	-0.4
2,851,374	-		SO2735	0.88	+0.6
2,851,374	-		SO2735	0.88	+0.4
2,851,374	-		SO2735	0.88	+0.7
2,851,374	-		SO2735	0.88	+0.6
2,851,374	-		SO2735	0.88	+0.2
2,851,374	-		SO2735	0.88	-0.2
2,851,374	-		SO2735	0.88	-0.2
2,851,374	-		SO2735	0.88	+0.7
2,851,374	-		SO2735	0.88	+0.3
2,851,374	-		SO2735	0.88	-0.2
2,851,374	-		SO2735	0.88	+1.0
2,851,374	-		SO2735	0.88	-0.1
2,851,374	-		SO2735	0.88	+0.4
2,851,374	-		SO2735	0.88	-0.9
2,851,374	-		SO2735	0.88	+0.9
2,851,374	-		SO2735	0.88	-0.3
2,851,374	-		SO2735	0.88	+1.8
2,851,374	-		SO2735	0.88	+0.1
2,851,374	-		SO2735	0.88	+1.4
2,851,375	-		SO2735	0.89	-0.9
2,851,375	-		SO2735	0.89	+0.9
2,851,375	-		SO2735	0.89	+0.6
2,851,375	-		SO2735	0.89	-0.3
2,851,380	-				-0.3
2,851,557	-				-0.0
2,851,668	+		SO2736	0.14	+0.5
2,851,668	+		SO2736	0.14	-0.2
2,851,668	+		SO2736	0.14	-0.0
2,851,676	-		SO2736	0.15	-1.0
2,851,805	+		SO2736	0.28	+0.3
2,851,885	-		SO2736	0.36	-0.9
2,851,885	-		SO2736	0.36	+0.8
2,851,885	-		SO2736	0.36	+0.2
2,851,988	-		SO2736	0.47	+0.0
2,852,003	+		SO2736	0.48	+0.2
2,852,022	-		SO2736	0.50	+0.2
2,852,068	+		SO2736	0.55	+1.0
2,852,092	+		SO2736	0.57	-0.0
2,852,109	+		SO2736	0.59	+0.1
2,852,126	+		SO2736	0.61	+0.1
2,852,126	-		SO2736	0.61	+0.6
2,852,134	-		SO2736	0.62	+0.5
2,852,213	+		SO2736	0.70	+0.4
2,852,218	+		SO2736	0.70	+0.3
2,852,218	+		SO2736	0.70	-0.5
2,852,220	+		SO2736	0.71	-0.3
2,852,226	-		SO2736	0.71	-0.3
2,852,226	-		SO2736	0.71	-0.2
2,852,226	-		SO2736	0.71	-0.1
2,852,228	-		SO2736	0.72	-0.0
2,852,245	-		SO2736	0.73	-0.1
2,852,251	-		SO2736	0.74	-0.5
2,852,278	-		SO2736	0.77	+0.7
2,852,311	+		SO2736	0.80	-0.4
2,852,315	+		SO2736	0.80	+0.1
2,852,319	-		SO2736	0.81	-0.0
2,852,329	-		SO2736	0.82	+0.6
2,852,334	-		SO2736	0.82	+0.1
2,852,340	-		SO2736	0.83	-0.4
2,852,346	-		SO2736	0.84	+2.5