Strain Fitness in Shewanella oneidensis MR-1 around SO1155

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
1,197,789	-		SO1154	0.78	-0.4
1,197,943	-				-0.7
1,198,319	+				+0.2
1,198,326	-				+1.1
1,198,334	-				+0.1
1,198,412	-				-0.0
1,198,916	+		SO1155	0.42	-0.0
1,198,924	-		SO1155	0.44	+1.1
1,198,952	-		SO1155	0.52	-0.4
1,199,107	+				+0.7
1,199,160	+				+0.2
1,199,168	-				-0.5
1,199,242	-				-0.8
1,199,242	-				+0.1
1,199,446	-		SO1156	0.11	+0.1
1,199,578	+		SO1156	0.17	-0.1
1,199,648	+		SO1156	0.21	-0.1
1,199,680	+		SO1156	0.22	-0.0
1,199,688	-		SO1156	0.23	+0.3
1,199,815	-		SO1156	0.28	+0.2
1,199,984	-		SO1156	0.36	-0.1
1,199,998	+		SO1156	0.37	+1.6
1,200,080	+		SO1156	0.41	-0.0
1,200,094	+		SO1156	0.41	-0.1