Strain Fitness in Shewanella amazonensis SB2B around Sama_1813

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
2,207,058	-				+1.2
2,207,103	-				-1.4
2,207,106	-				+1.0
2,207,106	-				-1.2
2,207,106	-				+0.7
2,207,106	-				-0.3
2,207,108	-				-0.4
2,207,126	-				+0.2
2,207,162	+				+0.9
2,207,163	-				-0.6
2,207,165	+				-0.7
2,207,166	-				-0.8
2,207,166	-				-0.5
2,207,166	-				+1.4
2,207,166	-				-0.7
2,207,204	+				+0.2
2,207,221	+				-1.3
2,207,224	+				+1.2
2,207,255	-				-1.1
2,207,344	-				+0.3
2,207,350	-				-0.3
2,207,587	+		Sama_1813	0.28	-2.0
2,207,587	+		Sama_1813	0.28	-0.3
2,207,588	-		Sama_1813	0.28	-1.3
2,207,814	-		Sama_1813	0.54	-1.8
2,207,868	+		Sama_1813	0.61	-3.2
2,207,869	-		Sama_1813	0.61	-0.8
2,208,039	+		Sama_1813	0.81	-0.1
2,208,045	+		Sama_1813	0.81	-0.8
2,208,045	+		Sama_1813	0.81	-0.3
2,208,046	-		Sama_1813	0.81	+0.5
2,208,046	-		Sama_1813	0.81	-0.3
2,208,046	-		Sama_1813	0.81	-1.0
2,208,049	+		Sama_1813	0.82	-1.1
2,208,095	+		Sama_1813	0.87	+0.7
2,208,111	+		Sama_1813	0.89	-0.8
2,208,186	+				+0.2
2,208,203	-				+0.0
2,208,254	+				+0.0
2,208,255	-				+0.3
2,208,351	+				-1.3
2,208,351	+				-0.2
2,208,353	+				-0.1
2,208,477	+				-0.6
2,208,482	+				+0.6
2,208,624	+		Sama_1814	0.16	+0.7
2,208,653	+		Sama_1814	0.18	+0.5
2,208,713	+		Sama_1814	0.22	+0.3
2,208,717	+		Sama_1814	0.23	+0.4
2,208,724	+		Sama_1814	0.23	+1.1
2,208,726	+		Sama_1814	0.23	+0.4
2,208,726	+		Sama_1814	0.23	-0.5
2,208,727	-		Sama_1814	0.23	-0.7
2,209,000	+		Sama_1814	0.42	+0.2
2,209,000	+		Sama_1814	0.42	-1.0
2,209,000	+		Sama_1814	0.42	-1.1
2,209,101	-		Sama_1814	0.49	-0.0