Strain Fitness in Shewanella amazonensis SB2B around Sama_1726

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
2,111,299	+		Sama_1724	0.89	+1.2
2,111,325	-		Sama_1724	0.90	-0.3
2,111,325	-		Sama_1724	0.90	+0.5
2,111,325	-		Sama_1724	0.90	-1.4
2,111,328	+				+0.7
2,111,328	+				+0.6
2,111,328	+				-0.5
2,111,328	+				-0.2
2,111,328	+				+0.9
2,111,328	+				-0.1
2,111,328	+				-1.4
2,111,329	-				-0.3
2,111,329	-				-0.3
2,111,375	+				+0.2
2,111,376	-				+0.1
2,111,433	+				-2.4
2,111,434	-				+0.2
2,111,527	+				-0.6
2,111,527	+				+0.6
2,111,545	+				-0.5
2,111,575	+				-0.6
2,111,599	+				-1.3
2,111,599	+				-1.4
2,111,602	-				-0.1
2,111,605	+				-0.3
2,111,605	+				-0.4
2,111,605	+				+0.0
2,111,605	+				-0.2
2,111,605	+				-0.5
2,111,605	+				+1.0
2,111,606	-				+0.5
2,111,614	+				+0.1
2,111,614	+				-1.4
2,111,618	+				-0.7
2,111,663	+				-0.6
2,111,664	-				-0.3
2,111,668	-				+1.1
2,111,668	-				-2.4
2,111,680	+				+0.7
2,111,692	+				-0.3
2,111,701	-				-0.6
2,111,725	+				-1.1
2,111,726	-				-0.9
2,111,729	+				-0.4
2,111,729	+				+0.7
2,111,729	+				+0.4
2,111,729	+				+0.9
2,111,729	+				-0.9
2,111,730	-				+1.2
2,111,730	-				+0.2
2,111,730	-				+0.6
2,111,730	-				+0.1
2,111,730	-				+0.1
2,111,730	-				-0.3
2,111,730	-				+0.3
2,111,730	-				-1.1
2,111,730	-				-1.3
2,111,730	-				-0.9
2,111,730	-				-0.5
2,111,730	-				-1.3
2,111,737	+				-1.7
2,111,738	-				+0.4
2,111,738	-				+0.6
2,111,761	+				-0.4
2,111,805	+		Sama_1725	0.14	+0.9
2,111,806	-		Sama_1725	0.14	-0.3
2,111,827	+		Sama_1725	0.18	-0.7
2,111,835	-		Sama_1725	0.20	+0.0
2,111,857	+		Sama_1725	0.24	-0.5
2,111,918	+		Sama_1725	0.36	+0.1
2,111,918	+		Sama_1725	0.36	-0.6
2,111,918	+		Sama_1725	0.36	+0.3
2,111,919	-		Sama_1725	0.36	-0.3
2,111,928	+		Sama_1725	0.38	-0.3
2,111,928	+		Sama_1725	0.38	+0.2
2,111,929	-		Sama_1725	0.38	-0.2
2,111,958	-		Sama_1725	0.43	+1.0
2,112,090	+		Sama_1725	0.69	+1.1
2,112,131	+		Sama_1725	0.76	+1.2
2,112,344	-		Sama_1726	0.25	-0.7
2,112,412	-		Sama_1726	0.44	-0.5
2,112,437	-		Sama_1726	0.51	-1.1
2,112,437	-		Sama_1726	0.51	-0.3
2,112,437	-		Sama_1726	0.51	-0.4