Strain Fitness in Shewanella amazonensis SB2B around Sama_1720

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
2,104,847	-		Sama_1719	0.29	-0.5
2,104,864	+		Sama_1719	0.30	-0.8
2,104,864	+		Sama_1719	0.30	-0.5
2,104,865	-		Sama_1719	0.30	+0.2
2,104,877	+		Sama_1719	0.31	-0.3
2,104,883	+		Sama_1719	0.32	-0.5
2,105,139	+		Sama_1719	0.54	-0.2
2,105,140	-		Sama_1719	0.55	+0.5
2,105,175	+		Sama_1719	0.58	+0.5
2,105,257	-		Sama_1719	0.65	+0.0
2,105,320	+		Sama_1719	0.70	+0.6
2,105,348	+		Sama_1719	0.73	+0.3
2,105,348	+		Sama_1719	0.73	+1.0
2,105,650	+				+0.6
2,105,702	+		Sama_1720	0.14	-1.3
2,105,702	+		Sama_1720	0.14	-0.3
2,105,840	-		Sama_1720	0.57	+2.5
2,105,840	-		Sama_1720	0.57	+0.5
2,105,953	+				+0.7
2,105,953	+				+1.0
2,105,953	+				-1.3
2,105,957	+				-1.0
2,105,957	+				-0.9
2,106,017	+		Sama_1721	0.15	-0.2
2,106,017	+		Sama_1721	0.15	-1.4
2,106,069	+		Sama_1721	0.33	+0.6
2,106,069	+		Sama_1721	0.33	-0.3
2,106,116	+		Sama_1721	0.49	+1.0
2,106,117	-		Sama_1721	0.49	+1.1
2,106,208	+		Sama_1721	0.80	+0.7
2,106,208	+		Sama_1721	0.80	-0.4
2,106,282	+				+0.1
2,106,368	+				-2.1
2,106,368	+				-1.1
2,106,452	-	ansA	Sama_1722	0.13	-1.1
2,106,715	+	ansA	Sama_1722	0.39	-1.9
2,106,716	-	ansA	Sama_1722	0.39	+1.5
2,106,924	+	ansA	Sama_1722	0.60	+0.1
2,106,924	+	ansA	Sama_1722	0.60	-2.0
2,106,924	+	ansA	Sama_1722	0.60	-0.6
2,106,924	+	ansA	Sama_1722	0.60	+1.7
2,106,924	+	ansA	Sama_1722	0.60	-0.5