Strain Fitness in Shewanella amazonensis SB2B around Sama_1338

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
1,632,764	-				+0.5
1,632,764	-				-0.2
1,632,902	-				-0.3
1,632,943	+				-0.1
1,632,943	+				-0.3
1,632,943	+				-0.2
1,632,945	+				+0.9
1,632,945	+				+0.3
1,632,945	+				-0.4
1,632,945	+				-0.9
1,632,945	+				+0.2
1,632,946	-				-0.1
1,632,946	-				+0.5
1,632,946	-				-1.7
1,632,950	+				-0.2
1,632,950	+				-2.1
1,632,950	+				+0.3
1,632,951	-				+0.4
1,632,951	-				+0.4
1,632,951	-				-0.9
1,632,951	-				+0.2
1,632,970	+				-0.7
1,632,989	-				-0.7
1,633,016	+				-0.7
1,633,017	-				-1.9
1,633,288	+		Sama_1340	0.36	-3.1
1,633,371	+		Sama_1340	0.47	-1.2
1,633,372	-		Sama_1340	0.47	-0.5
1,633,451	+		Sama_1340	0.57	-1.9
1,633,451	+		Sama_1340	0.57	-3.5
1,633,451	+		Sama_1340	0.57	-1.9
1,633,451	+		Sama_1340	0.57	-2.7
1,633,451	+		Sama_1340	0.57	-0.1
1,633,451	+		Sama_1340	0.57	-1.8
1,633,451	+		Sama_1340	0.57	-2.1
1,633,546	+		Sama_1340	0.70	-1.7