Strain Fitness in Shewanella amazonensis SB2B around Sama_0170

Experiment: Doxycycline hyclate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0001 mg/ml
199,494	+		Sama_0169	0.59	-1.1
199,654	-		Sama_0169	0.67	-0.9
199,695	+		Sama_0169	0.69	+1.8
199,750	-		Sama_0169	0.71	-0.1
199,780	-		Sama_0169	0.73	-0.9
200,017	-		Sama_0169	0.84	-0.1
200,085	+		Sama_0169	0.87	-0.9
200,143	+		Sama_0169	0.90	-1.5
200,150	-				+1.5
200,281	+				+0.6
200,338	+				+0.1
200,338	+				+0.4
200,339	-				-0.5
200,356	+				-0.9
200,368	+				-0.9
200,862	-		Sama_0170	0.32	+0.5
200,862	-		Sama_0170	0.32	-0.1
200,930	-		Sama_0170	0.36	-1.1
201,026	-		Sama_0170	0.42	-1.9
201,119	-		Sama_0170	0.48	-0.9
201,311	+		Sama_0170	0.60	+0.5
201,325	+		Sama_0170	0.61	-0.1
201,326	-		Sama_0170	0.61	-0.2
201,327	+		Sama_0170	0.61	+0.5
201,328	-		Sama_0170	0.61	+0.5
201,470	-		Sama_0170	0.70	-0.5
201,521	-		Sama_0170	0.74	-1.4
201,521	-		Sama_0170	0.74	+0.5
201,582	+		Sama_0170	0.78	+0.0
201,600	+		Sama_0170	0.79	-0.1
201,622	+		Sama_0170	0.80	+1.5
201,790	+				-0.4
201,791	-				+1.7
201,907	-				-1.0
201,907	-				-0.1
201,929	+				-0.7
202,283	+		Sama_0171	0.28	+0.6
202,284	-		Sama_0171	0.29	+0.7
202,343	-		Sama_0171	0.33	-1.4
202,343	-		Sama_0171	0.33	+0.7
202,571	-		Sama_0171	0.52	-0.1
202,608	-		Sama_0171	0.55	-0.5
202,617	+		Sama_0171	0.56	+1.5
202,843	-		Sama_0171	0.74	-0.9