Strain Fitness in Shewanella oneidensis MR-1 around SO2813

Experiment: D-Cycloserine 0.03125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.03125 mg/ml
2,933,593	+				-0.2
2,933,607	+				+0.4
2,933,636	+				-0.1
2,933,647	+				-0.5
2,933,672	+				-0.9
2,933,771	-				-0.5
2,933,833	-				+0.0
2,933,842	+				+0.3
2,933,842	+				-0.6
2,933,842	+				-1.2
2,933,850	-		SO_2812	0.12	+0.5
2,933,972	-		SO_2812	0.44	+0.0
2,933,972	-		SO_2812	0.44	-0.7
2,934,025	+		SO_2812	0.58	-0.0
2,934,043	-		SO_2812	0.63	+0.2
2,934,215	+				+0.0
2,934,215	+				-0.6
2,934,223	-				-0.4
2,934,270	-				+0.6
2,934,356	-				-0.4
2,934,374	-				-0.2
2,934,375	-				+0.4
2,934,659	-		SO2813	0.25	-0.4
2,934,663	-		SO2813	0.25	-0.4
2,934,778	+		SO2813	0.41	-0.1
2,934,778	+		SO2813	0.41	+0.3
2,934,778	+		SO2813	0.41	-1.4
2,934,786	-		SO2813	0.42	-0.2
2,934,786	-		SO2813	0.42	-0.0
2,934,786	-		SO2813	0.42	-0.1
2,934,786	-		SO2813	0.42	-0.6
2,934,786	-		SO2813	0.42	-1.1
2,934,871	-		SO2813	0.53	-0.4
2,934,978	-		SO2813	0.67	-0.4
2,935,239	+				-0.1
2,935,239	+				-0.0
2,935,247	-				+0.6
2,935,247	-				-0.3
2,935,247	-				-0.5
2,935,253	+				+0.5
2,935,253	+				+0.2
2,935,253	+				+0.3
2,935,253	+				-0.0
2,935,261	-				+0.3
2,935,261	-				-0.1
2,935,365	+				+0.3
2,935,373	-				+0.3
2,935,608	+				+0.1
2,935,608	+				+0.4
2,935,608	+				-0.4
2,935,608	+				+0.1
2,935,610	+				+0.2
2,935,610	+				-0.4
2,935,610	+				+0.2
2,935,610	+				-0.2
2,935,610	+				-0.4
2,935,616	-				+0.3
2,935,616	-				-0.6
2,935,616	-				-0.5
2,935,616	-				-0.4
2,935,616	-				-0.6
2,935,616	-				+0.2
2,935,616	-				-1.0
2,935,616	-				+0.1
2,935,618	-				-0.3
2,935,618	-				-0.1
2,935,618	-				-0.3
2,935,647	+				+0.5
2,935,654	-				-0.2
2,935,762	+				+0.5
2,935,762	+				-0.8
2,935,762	+				-1.3
2,935,772	+				-0.3
2,935,772	+				+0.1
2,935,772	+				+0.1
2,935,772	+				+0.1
2,935,772	+				-0.1
2,935,772	+				-0.6
2,935,772	+				-1.1
2,935,772	+				+0.4
2,935,772	+				+0.1
2,935,772	+				+0.1
2,935,772	+				+0.7
2,935,772	+				-0.1
2,935,772	+				-0.2
2,935,772	+				+0.5
2,935,772	+				-0.3
2,935,772	+				-0.4
2,935,772	+				-0.4
2,935,772	+				-1.6
2,935,772	+				+0.3
2,935,773	+				-0.9
2,935,775	-				+0.3
2,935,778	+				+0.5
2,935,780	-				+0.2
2,935,780	-				-0.1
2,935,780	-				+1.0
2,935,780	-				-1.0
2,935,780	-				-0.1
2,935,780	-				+0.2
2,935,780	-				-0.1
2,935,780	-				+0.8
2,935,780	-				+0.7
2,935,780	-				+0.5
2,935,780	-				+0.0
2,935,780	-				+0.1
2,935,780	-				+0.2
2,935,780	-				+0.1
2,935,780	-				+0.1
2,935,780	-				-0.1
2,935,780	-				-0.3
2,935,780	-				+0.5
2,935,780	-				+0.3
2,935,780	-				+0.1
2,935,790	-				-0.1
2,935,806	+				+0.3
2,935,814	-				+0.2
2,935,816	+				-0.3
2,935,857	-				-0.6
2,935,857	-				-1.6
2,935,883	+				-0.4
2,935,985	-				-0.1
2,936,135	+				-0.4
2,936,138	-				-0.3
2,936,152	-				-0.8