Strain Fitness in Shewanella oneidensis MR-1 around SO2022

Experiment: D-Cycloserine 0.03125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.03125 mg/ml
2,120,894	-				-1.1
2,121,920	+		SO2022	0.14	-0.3
2,121,920	+		SO2022	0.14	-0.3
2,121,922	-		SO2022	0.15	+1.1
2,121,948	-		SO2022	0.20	-0.6
2,121,963	-		SO2022	0.23	-0.1
2,122,043	+		SO2022	0.38	-0.1
2,122,043	+		SO2022	0.38	-1.1
2,122,067	+		SO2022	0.42	-0.8
2,122,075	+		SO2022	0.44	-0.4
2,122,311	+		SO2022	0.89	+0.6
2,122,371	-				-0.3
2,122,389	-				-0.2
2,122,414	-				+0.5
2,122,420	-				-0.2
2,122,464	-				-0.4
2,122,517	+				-0.6
2,122,517	+				-0.2
2,122,517	+				+0.4
2,122,525	-				+0.9
2,122,556	-				+0.3
2,123,045	+		SO2024	0.22	+0.2
2,123,100	-		SO2024	0.26	-0.1
2,123,328	+		SO2024	0.45	-0.6