Strain Fitness in Shewanella amazonensis SB2B around Sama_2784

Experiment: D-Cycloserine 0.03125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.03125 mg/ml
3,326,811	+				+1.1
3,326,812	-				-0.6
3,326,827	+				-1.2
3,326,827	+				+0.4
3,326,828	-				+0.5
3,326,828	-				-1.2
3,326,828	-				+0.2
3,326,828	-				+0.1
3,326,828	-				-0.8
3,326,828	-				-1.0
3,326,828	-				-0.2
3,326,829	+				-1.1
3,326,829	+				-1.3
3,326,829	+				-1.2
3,326,829	+				-0.2
3,326,829	+				-1.2
3,326,829	+				+2.4
3,326,829	+				-0.7
3,326,829	+				+0.3
3,326,830	-				-0.6
3,326,830	-				+2.3
3,326,830	-				+0.1
3,326,830	-				+0.8
3,326,830	-				-0.4
3,326,911	+				-2.0
3,326,911	+				-0.6
3,326,911	+				-0.2
3,326,911	+				-0.1
3,326,912	-				+0.6
3,326,912	-				+0.9
3,326,912	-				+0.1
3,326,949	-				-1.6
3,326,949	-				+0.0
3,327,016	+				-0.1
3,327,016	+				-0.4
3,327,016	+				-0.4
3,327,017	-				+0.2
3,327,076	-				+1.4
3,327,076	-				+0.8
3,327,146	-		Sama_2784	0.19	-0.6
3,327,156	-		Sama_2784	0.22	-2.7
3,327,191	-		Sama_2784	0.29	-0.2
3,327,191	-		Sama_2784	0.29	-0.1
3,327,200	+		Sama_2784	0.31	+1.3
3,327,200	+		Sama_2784	0.31	-0.5
3,327,200	+		Sama_2784	0.31	-1.4
3,327,200	+		Sama_2784	0.31	-0.7
3,327,200	+		Sama_2784	0.31	-0.8
3,327,200	+		Sama_2784	0.31	+0.0
3,327,200	+		Sama_2784	0.31	+0.4
3,327,201	-		Sama_2784	0.31	-2.3
3,327,201	-		Sama_2784	0.31	+1.0
3,327,214	+		Sama_2784	0.34	+0.7
3,327,214	+		Sama_2784	0.34	-0.3
3,327,238	+		Sama_2784	0.39	+1.0
3,327,238	+		Sama_2784	0.39	-0.5
3,327,238	+		Sama_2784	0.39	+0.8
3,327,239	-		Sama_2784	0.39	+0.1
3,327,319	+		Sama_2784	0.56	+0.5
3,327,362	+		Sama_2784	0.65	+0.1
3,327,363	-		Sama_2784	0.65	-1.0
3,327,363	-		Sama_2784	0.65	+0.6
3,327,363	-		Sama_2784	0.65	-1.6
3,327,435	+		Sama_2784	0.80	+0.0
3,327,435	+		Sama_2784	0.80	-1.0
3,327,435	+		Sama_2784	0.80	-0.4
3,327,759	+		Sama_2785	0.24	-2.9
3,327,759	+		Sama_2785	0.24	+0.7
3,327,759	+		Sama_2785	0.24	+1.6
3,327,759	+		Sama_2785	0.24	-0.4
3,327,759	+		Sama_2785	0.24	+0.3
3,327,759	+		Sama_2785	0.24	-0.3
3,327,759	+		Sama_2785	0.24	+0.0
3,327,759	+		Sama_2785	0.24	-0.6
3,327,760	-		Sama_2785	0.24	+0.1
3,327,760	-		Sama_2785	0.24	-0.7
3,327,760	-		Sama_2785	0.24	+0.2
3,327,760	-		Sama_2785	0.24	+0.3
3,327,776	+		Sama_2785	0.26	-0.9
3,327,777	-		Sama_2785	0.26	-1.1
3,327,866	+		Sama_2785	0.38	-0.1
3,327,866	+		Sama_2785	0.38	+1.6
3,327,891	+		Sama_2785	0.41	-0.7
3,327,892	-		Sama_2785	0.41	+0.1
3,327,892	-		Sama_2785	0.41	-0.8
3,327,893	+		Sama_2785	0.41	+1.0
3,327,893	+		Sama_2785	0.41	+0.2
3,327,893	-		Sama_2785	0.41	-0.5
3,327,893	+		Sama_2785	0.41	+0.0
3,327,893	+		Sama_2785	0.41	-0.2
3,327,893	+		Sama_2785	0.41	-0.4
3,327,893	+		Sama_2785	0.41	-2.2
3,327,893	+		Sama_2785	0.41	+0.3
3,327,894	-		Sama_2785	0.42	+0.5
3,327,894	-		Sama_2785	0.42	-0.3
3,327,894	-		Sama_2785	0.42	-0.6
3,327,894	-		Sama_2785	0.42	-1.7
3,327,894	-		Sama_2785	0.42	+0.3
3,327,929	+		Sama_2785	0.46	-2.0
3,327,929	+		Sama_2785	0.46	-0.5
3,327,991	+		Sama_2785	0.54	-1.4
3,328,011	+		Sama_2785	0.57	-0.5
3,328,012	-		Sama_2785	0.57	-0.1
3,328,012	-		Sama_2785	0.57	-0.1
3,328,012	-		Sama_2785	0.57	-1.0
3,328,033	+		Sama_2785	0.60	-1.3
3,328,034	-		Sama_2785	0.60	-1.1
3,328,034	-		Sama_2785	0.60	+1.0
3,328,034	-		Sama_2785	0.60	+0.8
3,328,034	-		Sama_2785	0.60	+0.6
3,328,125	+		Sama_2785	0.72	-0.3
3,328,126	-		Sama_2785	0.72	-0.4
3,328,126	-		Sama_2785	0.72	-0.4
3,328,126	-		Sama_2785	0.72	+1.6
3,328,126	-		Sama_2785	0.72	-1.7
3,328,139	+		Sama_2785	0.74	+0.6
3,328,222	+		Sama_2785	0.85	+0.6
3,328,223	-		Sama_2785	0.85	+1.3
3,328,223	-		Sama_2785	0.85	+0.7
3,328,254	+		Sama_2785	0.89	+1.3
3,328,254	+		Sama_2785	0.89	-2.6
3,328,255	-		Sama_2785	0.89	-0.7
3,328,284	+				-0.1
3,328,285	-				+1.0
3,328,285	-				-0.7
3,328,285	-				+0.1
3,328,335	+				-1.1
3,328,335	+				-0.0
3,328,336	-				-0.2
3,328,348	+				-0.1
3,328,349	-				-2.3
3,328,401	-				-0.7
3,328,424	+		Sama_2786	0.12	-1.1
3,328,457	+		Sama_2786	0.18	-2.0
3,328,457	+		Sama_2786	0.18	-2.6
3,328,457	+		Sama_2786	0.18	-2.3
3,328,457	+		Sama_2786	0.18	-1.5
3,328,457	+		Sama_2786	0.18	-0.4
3,328,458	-		Sama_2786	0.18	-0.7
3,328,458	-		Sama_2786	0.18	-2.5
3,328,458	-		Sama_2786	0.18	-1.4
3,328,458	-		Sama_2786	0.18	-0.7
3,328,458	-		Sama_2786	0.18	-2.9
3,328,458	-		Sama_2786	0.18	-0.7
3,328,458	-		Sama_2786	0.18	-1.8
3,328,522	+		Sama_2786	0.28	-1.4
3,328,523	-		Sama_2786	0.28	-2.6