Strain Fitness in Shewanella amazonensis SB2B around Sama_2755

Experiment: D-Cycloserine 0.03125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.03125 mg/ml
3,292,694	-				+0.4
3,292,756	-				+0.5
3,292,764	+				-1.6
3,292,765	-				-0.7
3,292,765	-				+1.0
3,292,777	+				-0.4
3,292,778	-				-1.6
3,292,804	+				+0.4
3,292,828	-				+0.6
3,292,828	-				-0.8
3,292,870	+		Sama_2754	0.16	-1.0
3,292,870	+		Sama_2754	0.16	-2.4
3,292,871	-		Sama_2754	0.16	-0.7
3,292,871	-		Sama_2754	0.16	-1.6
3,292,930	+		Sama_2754	0.24	-0.1
3,293,089	+		Sama_2754	0.45	-0.3
3,293,089	+		Sama_2754	0.45	+0.0
3,293,089	+		Sama_2754	0.45	-2.6
3,293,090	-		Sama_2754	0.45	-0.7
3,293,119	-		Sama_2754	0.49	-2.8
3,293,140	+		Sama_2754	0.52	-1.0
3,293,140	+		Sama_2754	0.52	-1.1
3,293,140	+		Sama_2754	0.52	-0.6
3,293,140	+		Sama_2754	0.52	-3.4
3,293,142	+		Sama_2754	0.52	-2.6
3,293,142	+		Sama_2754	0.52	-0.2
3,293,142	+		Sama_2754	0.52	-2.5
3,293,142	+		Sama_2754	0.52	+0.6
3,293,142	+		Sama_2754	0.52	-0.2
3,293,143	-		Sama_2754	0.52	-0.7
3,293,143	-		Sama_2754	0.52	-0.4
3,293,143	-		Sama_2754	0.52	-0.8
3,293,143	-		Sama_2754	0.52	-0.3
3,293,143	-		Sama_2754	0.52	-1.3
3,293,156	-		Sama_2754	0.54	-0.6
3,293,172	+		Sama_2754	0.56	+0.0
3,293,172	+		Sama_2754	0.56	-2.2
3,293,173	-		Sama_2754	0.56	+0.4
3,293,173	-		Sama_2754	0.56	-0.9
3,293,173	-		Sama_2754	0.56	-1.0
3,293,173	-		Sama_2754	0.56	-2.2
3,293,193	+		Sama_2754	0.59	-1.9
3,293,193	+		Sama_2754	0.59	+0.0
3,293,194	-		Sama_2754	0.59	+0.0
3,293,194	-		Sama_2754	0.59	-0.0
3,293,194	-		Sama_2754	0.59	-0.4
3,293,194	-		Sama_2754	0.59	-3.1
3,293,212	+		Sama_2754	0.62	-2.1
3,293,212	+		Sama_2754	0.62	-2.2
3,293,213	-		Sama_2754	0.62	+0.8
3,293,213	-		Sama_2754	0.62	-3.0
3,293,213	-		Sama_2754	0.62	-0.8
3,293,214	+		Sama_2754	0.62	-1.5
3,293,214	+		Sama_2754	0.62	-0.2
3,293,214	+		Sama_2754	0.62	-1.5
3,293,215	-		Sama_2754	0.62	-0.6
3,293,215	-		Sama_2754	0.62	-1.4
3,293,215	-		Sama_2754	0.62	-1.3
3,293,215	-		Sama_2754	0.62	-1.2
3,293,215	-		Sama_2754	0.62	+1.0
3,293,218	+		Sama_2754	0.62	-0.9
3,293,218	+		Sama_2754	0.62	+0.0
3,293,219	-		Sama_2754	0.62	-1.3
3,293,219	-		Sama_2754	0.62	-1.4
3,293,219	-		Sama_2754	0.62	-2.0
3,293,238	+		Sama_2754	0.65	-1.7
3,293,238	+		Sama_2754	0.65	-0.7
3,293,274	+		Sama_2754	0.70	+0.4
3,293,274	+		Sama_2754	0.70	-0.4
3,293,292	+		Sama_2754	0.72	-0.1
3,293,309	-		Sama_2754	0.75	-1.6
3,293,509	+				-1.4
3,293,509	+				+0.1
3,293,510	-				-2.5
3,293,510	-				-0.1
3,293,574	-				+0.3
3,293,673	+				-1.3
3,293,673	+				+1.1
3,293,714	+				-0.6
3,293,714	+				-0.7
3,293,743	+				-2.1
3,293,797	+		Sama_2755	0.12	-1.6
3,293,798	-		Sama_2755	0.12	-1.4
3,293,799	+		Sama_2755	0.12	+0.1
3,293,799	+		Sama_2755	0.12	-0.9
3,293,799	+		Sama_2755	0.12	-1.0
3,293,799	+		Sama_2755	0.12	-0.7
3,293,800	-		Sama_2755	0.12	-1.1
3,293,800	-		Sama_2755	0.12	+0.2
3,293,863	-		Sama_2755	0.16	-0.4
3,293,863	-		Sama_2755	0.16	+0.1
3,293,863	-		Sama_2755	0.16	-0.9
3,293,863	-		Sama_2755	0.16	+0.0
3,293,863	-		Sama_2755	0.16	-1.1
3,293,863	-		Sama_2755	0.16	-0.9
3,293,863	-		Sama_2755	0.16	+1.0
3,293,863	-		Sama_2755	0.16	-1.9
3,294,034	+		Sama_2755	0.28	+0.2
3,294,035	-		Sama_2755	0.28	-1.4
3,294,109	+		Sama_2755	0.33	-0.2
3,294,109	+		Sama_2755	0.33	+0.0
3,294,109	+		Sama_2755	0.33	+0.1
3,294,110	-		Sama_2755	0.33	-0.5
3,294,110	-		Sama_2755	0.33	-0.3
3,294,110	-		Sama_2755	0.33	+0.6
3,294,110	-		Sama_2755	0.33	-0.5
3,294,111	+		Sama_2755	0.33	+0.3
3,294,112	-		Sama_2755	0.33	-0.7
3,294,112	-		Sama_2755	0.33	+0.8
3,294,294	+		Sama_2755	0.45	-0.6
3,294,294	+		Sama_2755	0.45	-0.7
3,294,295	-		Sama_2755	0.45	-1.2
3,294,295	-		Sama_2755	0.45	-2.1
3,294,304	+		Sama_2755	0.46	-0.2
3,294,321	+		Sama_2755	0.47	-0.4
3,294,321	+		Sama_2755	0.47	-0.3
3,294,321	+		Sama_2755	0.47	-1.0
3,294,322	-		Sama_2755	0.47	-0.1
3,294,322	-		Sama_2755	0.47	+0.1
3,294,353	-		Sama_2755	0.49	-0.6
3,294,358	+		Sama_2755	0.50	+0.2
3,294,359	-		Sama_2755	0.50	-0.3
3,294,359	-		Sama_2755	0.50	-1.4
3,294,376	+		Sama_2755	0.51	-0.1
3,294,377	-		Sama_2755	0.51	-1.0
3,294,377	-		Sama_2755	0.51	-2.0
3,294,377	-		Sama_2755	0.51	-0.9
3,294,478	-		Sama_2755	0.58	-0.8
3,294,478	-		Sama_2755	0.58	+1.0
3,294,495	+		Sama_2755	0.59	-1.3
3,294,495	+		Sama_2755	0.59	+0.1
3,294,500	-		Sama_2755	0.59	-1.2
3,294,500	-		Sama_2755	0.59	+0.9
3,294,500	-		Sama_2755	0.59	+0.0
3,294,543	+		Sama_2755	0.62	-0.1
3,294,543	+		Sama_2755	0.62	-2.2
3,294,668	-		Sama_2755	0.70	+0.2
3,294,699	+		Sama_2755	0.72	-0.6
3,294,700	-		Sama_2755	0.72	-0.5
3,294,731	-		Sama_2755	0.74	-0.5
3,294,809	+		Sama_2755	0.80	-0.4
3,294,810	-		Sama_2755	0.80	-1.0
3,295,126	+				+0.6
3,295,126	+				+0.8
3,295,127	-				-2.6
3,295,127	-				+0.0
3,295,146	+				-1.7
3,295,147	-				-1.2
3,295,168	+				+0.3
3,295,168	+				-0.7
3,295,169	-				+0.1
3,295,169	-				-0.8
3,295,207	+				+0.3
3,295,207	+				+0.1
3,295,208	-				-0.1
3,295,211	+				-0.7
3,295,211	+				-1.4
3,295,252	+				-2.0
3,295,252	+				-0.1
3,295,601	-		Sama_2756	0.33	+0.0