Strain Fitness in Shewanella amazonensis SB2B around Sama_1849

Experiment: D-Cycloserine 0.03125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.03125 mg/ml
2,251,359	+		Sama_1848	0.38	-0.8
2,251,480	+		Sama_1848	0.46	-2.9
2,251,480	+		Sama_1848	0.46	-1.7
2,251,568	+		Sama_1848	0.52	-0.5
2,251,679	-		Sama_1848	0.59	-1.0
2,251,766	+		Sama_1848	0.65	+0.5
2,251,794	+		Sama_1848	0.67	-1.0
2,251,894	+		Sama_1848	0.73	+0.2
2,251,895	-		Sama_1848	0.73	-1.5
2,251,946	+		Sama_1848	0.77	-0.6
2,251,964	+		Sama_1848	0.78	-0.2
2,251,964	+		Sama_1848	0.78	-1.3
2,251,964	+		Sama_1848	0.78	-0.5
2,251,965	-		Sama_1848	0.78	-0.1
2,251,965	-		Sama_1848	0.78	-1.2
2,251,968	+		Sama_1848	0.78	-0.3
2,251,969	-		Sama_1848	0.78	-2.3
2,251,987	+		Sama_1848	0.79	+0.7
2,251,988	-		Sama_1848	0.80	+0.7
2,252,019	+		Sama_1848	0.82	-0.5
2,252,019	+		Sama_1848	0.82	-1.4
2,252,067	+		Sama_1848	0.85	-0.4
2,252,068	-		Sama_1848	0.85	+0.6
2,252,144	-		Sama_1848	0.90	+0.7
2,252,274	+				-2.0
2,252,293	+				-0.5
2,252,293	+				-0.6
2,252,378	+				-0.2
2,252,543	-		Sama_1849	0.26	-1.7
2,252,606	+		Sama_1849	0.32	-0.6
2,252,665	+		Sama_1849	0.38	-0.9
2,252,665	+		Sama_1849	0.38	-0.1
2,252,665	+		Sama_1849	0.38	-0.3
2,252,665	+		Sama_1849	0.38	-1.5
2,252,670	+		Sama_1849	0.39	+0.7
2,252,725	+		Sama_1849	0.45	-1.6
2,252,725	+		Sama_1849	0.45	-0.5
2,252,759	+		Sama_1849	0.48	-0.8
2,252,759	+		Sama_1849	0.48	+0.6
2,252,759	+		Sama_1849	0.48	+0.1
2,252,830	+		Sama_1849	0.56	-1.0
2,252,902	+		Sama_1849	0.63	+0.8
2,252,902	+		Sama_1849	0.63	-1.7
2,252,902	+		Sama_1849	0.63	-0.3
2,253,058	+		Sama_1849	0.80	-1.5
2,253,099	+		Sama_1849	0.84	-0.1
2,253,160	+				+0.7
2,253,160	+				-0.3
2,253,216	-				-0.1
2,253,437	+		Sama_1850	0.13	-1.7
2,253,437	+		Sama_1850	0.13	+1.4
2,253,437	+		Sama_1850	0.13	-0.4
2,253,437	+		Sama_1850	0.13	-2.6
2,253,437	+		Sama_1850	0.13	-0.3
2,253,439	+		Sama_1850	0.13	-1.9
2,253,439	+		Sama_1850	0.13	-0.7
2,253,440	-		Sama_1850	0.13	-0.7
2,253,459	+		Sama_1850	0.15	-0.7
2,253,502	+		Sama_1850	0.17	-1.1
2,253,627	+		Sama_1850	0.25	-1.0
2,253,628	-		Sama_1850	0.25	+1.1
2,253,629	+		Sama_1850	0.25	+0.3
2,254,052	-		Sama_1850	0.50	+0.3
2,254,112	-		Sama_1850	0.54	-2.1
2,254,132	+		Sama_1850	0.55	-0.9
2,254,133	-		Sama_1850	0.55	+1.3
2,254,169	+		Sama_1850	0.57	-0.3
2,254,178	-		Sama_1850	0.58	-0.1