Strain Fitness in Shewanella amazonensis SB2B around Sama_1848

Experiment: D-Cycloserine 0.03125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.03125 mg/ml
2,249,793	+		Sama_1846	0.78	-0.0
2,249,794	-		Sama_1846	0.78	-0.3
2,249,934	+				-1.6
2,249,981	+				-0.3
2,250,046	+				-1.3
2,250,046	+				-2.0
2,250,058	+				-0.7
2,250,084	+				-0.7
2,250,085	-				-0.7
2,250,292	+		Sama_1847	0.34	+0.3
2,250,318	+		Sama_1847	0.38	-0.0
2,250,513	+		Sama_1847	0.65	-0.3
2,250,542	+		Sama_1847	0.69	-0.7
2,250,543	-		Sama_1847	0.69	-0.1
2,250,638	+		Sama_1847	0.82	-0.1
2,250,663	+		Sama_1847	0.86	-1.0
2,250,804	+				+1.3
2,250,858	+				-0.0
2,250,912	+				-1.5
2,250,924	-				-2.5
2,251,114	+		Sama_1848	0.21	-1.9
2,251,114	+		Sama_1848	0.21	+0.6
2,251,114	+		Sama_1848	0.21	+0.9
2,251,114	+		Sama_1848	0.21	-0.4
2,251,117	+		Sama_1848	0.22	+0.4
2,251,117	+		Sama_1848	0.22	-0.5
2,251,118	-		Sama_1848	0.22	-0.6
2,251,120	-		Sama_1848	0.22	-0.4
2,251,270	+		Sama_1848	0.32	-0.9
2,251,286	+		Sama_1848	0.33	-0.4
2,251,286	+		Sama_1848	0.33	-2.5
2,251,359	+		Sama_1848	0.38	-0.8
2,251,480	+		Sama_1848	0.46	-2.9
2,251,480	+		Sama_1848	0.46	-1.7
2,251,568	+		Sama_1848	0.52	-0.5
2,251,679	-		Sama_1848	0.59	-1.0
2,251,766	+		Sama_1848	0.65	+0.5
2,251,794	+		Sama_1848	0.67	-1.0
2,251,894	+		Sama_1848	0.73	+0.2
2,251,895	-		Sama_1848	0.73	-1.5
2,251,946	+		Sama_1848	0.77	-0.6
2,251,964	+		Sama_1848	0.78	-0.2
2,251,964	+		Sama_1848	0.78	-1.3
2,251,964	+		Sama_1848	0.78	-0.5
2,251,965	-		Sama_1848	0.78	-0.1
2,251,965	-		Sama_1848	0.78	-1.2
2,251,968	+		Sama_1848	0.78	-0.3
2,251,969	-		Sama_1848	0.78	-2.3
2,251,987	+		Sama_1848	0.79	+0.7
2,251,988	-		Sama_1848	0.80	+0.7
2,252,019	+		Sama_1848	0.82	-0.5
2,252,019	+		Sama_1848	0.82	-1.4
2,252,067	+		Sama_1848	0.85	-0.4
2,252,068	-		Sama_1848	0.85	+0.6
2,252,144	-		Sama_1848	0.90	+0.7
2,252,274	+				-2.0
2,252,293	+				-0.5
2,252,293	+				-0.6
2,252,378	+				-0.2
2,252,543	-		Sama_1849	0.26	-1.7
2,252,606	+		Sama_1849	0.32	-0.6
2,252,665	+		Sama_1849	0.38	-0.9
2,252,665	+		Sama_1849	0.38	-0.1
2,252,665	+		Sama_1849	0.38	-0.3
2,252,665	+		Sama_1849	0.38	-1.5
2,252,670	+		Sama_1849	0.39	+0.7
2,252,725	+		Sama_1849	0.45	-1.6
2,252,725	+		Sama_1849	0.45	-0.5
2,252,759	+		Sama_1849	0.48	-0.8
2,252,759	+		Sama_1849	0.48	+0.6
2,252,759	+		Sama_1849	0.48	+0.1
2,252,830	+		Sama_1849	0.56	-1.0
2,252,902	+		Sama_1849	0.63	+0.8
2,252,902	+		Sama_1849	0.63	-1.7
2,252,902	+		Sama_1849	0.63	-0.3
2,253,058	+		Sama_1849	0.80	-1.5
2,253,099	+		Sama_1849	0.84	-0.1
2,253,160	+				+0.7
2,253,160	+				-0.3
2,253,216	-				-0.1