Strain Fitness in Shewanella amazonensis SB2B around Sama_1746

Experiment: D-Cycloserine 0.03125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.03125 mg/ml
2,135,221	+		Sama_1744	0.70	+1.3
2,135,221	+		Sama_1744	0.70	-1.4
2,135,221	+		Sama_1744	0.70	-0.1
2,135,323	+		Sama_1744	0.76	+1.0
2,135,324	-		Sama_1744	0.76	+0.9
2,135,324	-		Sama_1744	0.76	+1.7
2,135,411	-		Sama_1744	0.81	+0.3
2,135,411	-		Sama_1744	0.81	+1.0
2,135,654	+				+0.6
2,135,661	-				+0.4
2,135,708	+				-0.1
2,135,709	-				+0.2
2,135,742	-				+1.2
2,135,834	-		Sama_1745	0.22	+0.0
2,135,850	-		Sama_1745	0.31	-0.0
2,135,850	-		Sama_1745	0.31	+0.9
2,135,850	-		Sama_1745	0.31	-0.9
2,135,944	-		Sama_1745	0.81	+1.5
2,135,989	+				-1.3
2,135,996	+				+1.3
2,135,997	-				-1.5
2,135,997	-				-0.7
2,136,015	-				+0.3
2,136,016	+				-0.5
2,136,016	+				+0.6
2,136,031	-				-1.1
2,136,039	-				-1.7
2,136,048	-				-0.7
2,136,054	+				-0.6
2,136,074	+				+1.8
2,136,075	-				-1.6
2,136,075	-				+1.3
2,136,114	+				-0.0
2,136,292	+		Sama_1746	0.32	+0.3
2,136,292	+		Sama_1746	0.32	-0.7
2,136,465	+		Sama_1746	0.85	-1.5
2,136,490	+				-2.7