Strain Fitness in Shewanella amazonensis SB2B around Sama_1708

Experiment: D-Cycloserine 0.03125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.03125 mg/ml
2,086,691	+				+0.2
2,086,692	-				+1.0
2,086,757	-				+0.8
2,086,795	+				+0.3
2,086,834	+				-0.2
2,086,834	+				-0.7
2,086,835	-				-2.2
2,086,878	+		Sama_1707	0.18	+0.6
2,086,893	+		Sama_1707	0.21	-0.7
2,086,895	+		Sama_1707	0.21	-0.0
2,086,895	+		Sama_1707	0.21	-1.0
2,086,895	+		Sama_1707	0.21	+1.3
2,086,896	-		Sama_1707	0.21	-0.5
2,086,896	-		Sama_1707	0.21	-0.7
2,086,896	-		Sama_1707	0.21	-0.3
2,087,004	+		Sama_1707	0.43	+0.3
2,087,004	+		Sama_1707	0.43	-2.0
2,087,005	-		Sama_1707	0.43	+0.5
2,087,005	-		Sama_1707	0.43	+0.0
2,087,005	-		Sama_1707	0.43	+0.1
2,087,005	-		Sama_1707	0.43	-0.9
2,087,080	-		Sama_1707	0.58	+1.1
2,087,080	-		Sama_1707	0.58	+0.2
2,087,149	+		Sama_1707	0.72	+0.7
2,087,158	+		Sama_1707	0.74	-1.0
2,087,159	-		Sama_1707	0.74	-0.1
2,087,159	-		Sama_1707	0.74	-1.6
2,087,179	+		Sama_1707	0.78	+0.8
2,087,230	-		Sama_1707	0.89	-0.8
2,087,230	-		Sama_1707	0.89	+0.2
2,087,230	-		Sama_1707	0.89	-0.2
2,087,230	-		Sama_1707	0.89	-0.0
2,087,230	-		Sama_1707	0.89	-2.0
2,087,330	+				-0.9
2,087,378	+				-0.9
2,087,379	-				+0.3
2,087,388	+				+2.0
2,087,389	-				+0.9
2,087,422	-				-0.0
2,087,425	-				+0.5
2,087,479	+				+0.8
2,087,479	+				-0.1
2,087,512	-				+0.4
2,087,696	+		Sama_1708	0.15	-0.0
2,087,704	+		Sama_1708	0.16	-1.5
2,087,704	+		Sama_1708	0.16	-0.7
2,087,711	-		Sama_1708	0.17	-1.0
2,087,791	+		Sama_1708	0.24	-2.5
2,087,826	-		Sama_1708	0.28	-0.3
2,087,955	+		Sama_1708	0.40	-1.5
2,087,956	-		Sama_1708	0.40	-2.2
2,087,956	-		Sama_1708	0.40	-1.5
2,088,044	+		Sama_1708	0.49	-1.3
2,088,063	-		Sama_1708	0.50	-1.3
2,088,215	-		Sama_1708	0.65	-1.5
2,088,448	+		Sama_1708	0.87	-1.5
2,088,563	-				-0.4
2,088,580	-				+1.3
2,088,597	-				-1.3
2,088,597	-				+0.3
2,088,597	-				-1.0
2,088,632	+				-0.6
2,088,638	-				+1.3
2,088,685	+				-0.7
2,088,689	+				-0.8
2,088,689	+				-0.8
2,088,689	+				+1.1
2,088,690	-				-0.1
2,088,690	-				+0.1
2,088,719	+				+0.1
2,088,733	+				-1.0
2,088,734	-				-0.2
2,088,734	-				-0.3
2,088,843	-				+0.3
2,088,894	-		Sama_1709	0.14	-1.3
2,088,910	+		Sama_1709	0.15	-0.9
2,088,968	+		Sama_1709	0.20	-0.5
2,088,969	-		Sama_1709	0.20	-1.7
2,088,969	-		Sama_1709	0.20	-0.7
2,089,049	+		Sama_1709	0.27	-0.5
2,089,099	+		Sama_1709	0.31	+2.3
2,089,182	-		Sama_1709	0.38	+1.3
2,089,265	-		Sama_1709	0.45	+0.7
2,089,273	+		Sama_1709	0.46	+0.1
2,089,280	+		Sama_1709	0.46	-0.0
2,089,280	+		Sama_1709	0.46	+0.9
2,089,281	-		Sama_1709	0.46	+0.3
2,089,448	+		Sama_1709	0.61	+0.9
2,089,459	+		Sama_1709	0.61	-0.0
2,089,459	+		Sama_1709	0.61	-0.3
2,089,459	+		Sama_1709	0.61	+1.3
2,089,459	+		Sama_1709	0.61	-2.0
2,089,459	+		Sama_1709	0.61	+0.3
2,089,459	+		Sama_1709	0.61	-2.0
2,089,459	+		Sama_1709	0.61	-0.7
2,089,460	-		Sama_1709	0.62	-0.3
2,089,460	-		Sama_1709	0.62	+1.3
2,089,460	-		Sama_1709	0.62	+0.3
2,089,460	-		Sama_1709	0.62	-1.7
2,089,460	-		Sama_1709	0.62	+0.3
2,089,460	-		Sama_1709	0.62	-0.7
2,089,460	-		Sama_1709	0.62	-1.9
2,089,462	+		Sama_1709	0.62	+0.3
2,089,483	+		Sama_1709	0.64	+0.1
2,089,484	-		Sama_1709	0.64	-0.0
2,089,484	-		Sama_1709	0.64	+0.7
2,089,568	+		Sama_1709	0.71	-2.2
2,089,568	+		Sama_1709	0.71	+2.9
2,089,569	-		Sama_1709	0.71	-0.7
2,089,569	-		Sama_1709	0.71	+0.8
2,089,569	-		Sama_1709	0.71	-0.7