Strain Fitness in Shewanella amazonensis SB2B around Sama_1371

Experiment: D-Cycloserine 0.03125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.03125 mg/ml
1,661,474	+		Sama_1370	0.24	-1.4
1,661,474	+		Sama_1370	0.24	-0.8
1,661,475	-		Sama_1370	0.24	+0.7
1,661,475	-		Sama_1370	0.24	+0.4
1,661,475	-		Sama_1370	0.24	-0.1
1,661,475	-		Sama_1370	0.24	+1.2
1,661,475	-		Sama_1370	0.24	+0.1
1,661,475	-		Sama_1370	0.24	-1.7
1,661,475	-		Sama_1370	0.24	+0.1
1,661,565	-		Sama_1370	0.39	+0.7
1,661,948	-				-1.4
1,661,948	-				-1.2
1,661,948	-				-0.3
1,662,035	-				-1.1
1,662,035	-				+1.4
1,662,035	-				-0.8
1,662,035	-				-0.4
1,662,049	-				-0.6
1,662,123	-				-1.1
1,662,168	+				-0.2
1,662,422	-				-1.1
1,662,447	+				+0.9
1,662,448	-				-1.6
1,662,521	+		Sama_1371	0.13	+0.8
1,662,524	+		Sama_1371	0.14	+0.4
1,662,525	-		Sama_1371	0.14	+0.4
1,662,636	+		Sama_1371	0.31	+0.6
1,662,636	+		Sama_1371	0.31	+1.8
1,662,637	-		Sama_1371	0.31	+0.0
1,662,765	+		Sama_1371	0.51	-1.6
1,662,765	+		Sama_1371	0.51	+1.2
1,662,765	+		Sama_1371	0.51	-0.6
1,662,798	+		Sama_1371	0.57	-0.8
1,662,798	+		Sama_1371	0.57	+0.5
1,662,819	+		Sama_1371	0.60	+0.4
1,662,819	+		Sama_1371	0.60	+1.2
1,662,820	-		Sama_1371	0.60	+2.4
1,662,820	-		Sama_1371	0.60	-0.5
1,662,914	-		Sama_1371	0.75	+1.4
1,662,925	-		Sama_1371	0.76	+0.0
1,662,966	+		Sama_1371	0.83	-1.1
1,663,047	+				+0.9
1,663,047	+				+0.5
1,663,048	-				-0.4
1,663,048	-				-2.2
1,663,065	+				-1.9
1,663,067	+				+0.8
1,663,068	-				-0.5
1,663,068	-				-0.5
1,663,068	-				+0.4
1,663,068	-				-1.0
1,663,075	-				+1.4
1,663,075	-				-0.0
1,663,200	+				-0.4
1,663,200	+				-2.2
1,663,200	+				-0.5
1,663,200	+				-0.5
1,663,200	+				-1.5
1,663,200	+				+0.6
1,663,200	+				-2.1
1,663,201	-				+0.2
1,663,201	-				-0.1
1,663,201	-				-0.2
1,663,201	-				+1.0
1,663,201	-				-0.2
1,663,201	-				-0.4
1,663,201	-				+0.6
1,663,206	+				+0.5
1,663,207	-				+0.7
1,663,260	+		Sama_1372	0.12	-0.3
1,663,260	+		Sama_1372	0.12	-0.2
1,663,260	+		Sama_1372	0.12	+0.0
1,663,261	-		Sama_1372	0.12	-2.1
1,663,261	-		Sama_1372	0.12	-0.4
1,663,438	-		Sama_1372	0.33	+0.3
1,663,467	+		Sama_1372	0.37	-0.9
1,663,467	+		Sama_1372	0.37	-0.1
1,663,468	-		Sama_1372	0.37	-1.8
1,663,468	-		Sama_1372	0.37	-2.1
1,663,528	-		Sama_1372	0.44	-1.8
1,663,600	+		Sama_1372	0.53	-0.5
1,663,611	-		Sama_1372	0.54	+0.1
1,663,636	-		Sama_1372	0.57	-0.5
1,663,651	+		Sama_1372	0.59	+2.5
1,663,652	-		Sama_1372	0.59	+0.2
1,663,652	-		Sama_1372	0.59	-1.1
1,663,661	+		Sama_1372	0.60	+0.2
1,663,709	+		Sama_1372	0.66	+0.2
1,663,710	-		Sama_1372	0.66	-1.0
1,663,737	-		Sama_1372	0.70	+1.4
1,663,745	+		Sama_1372	0.71	-1.4
1,663,745	+		Sama_1372	0.71	-0.2
1,663,746	-		Sama_1372	0.71	+1.1
1,663,774	+		Sama_1372	0.74	+0.0
1,663,903	+		Sama_1372	0.90	-1.1
1,663,904	-		Sama_1372	0.90	+0.2
1,663,939	-				+1.4
1,663,979	+				+0.4
1,663,979	+				-1.1
1,663,980	-				-0.6
1,663,999	+				+1.4
1,664,000	-				-1.6
1,664,018	+				-0.5
1,664,018	+				+0.5
1,664,038	+				+0.0