Strain Fitness in Shewanella amazonensis SB2B around Sama_1323

Experiment: D-Cycloserine 0.03125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.03125 mg/ml
1,611,410	+		Sama_1322	0.86	-0.2
1,611,455	+		Sama_1322	0.87	-1.6
1,611,455	+		Sama_1322	0.87	-1.4
1,611,455	+		Sama_1322	0.87	+0.6
1,611,455	+		Sama_1322	0.87	+1.7
1,611,783	+				+0.2
1,611,783	+				-0.6
1,611,783	+				-2.1
1,611,783	+				+0.7
1,611,783	+				+0.8
1,611,784	-				+0.3
1,611,784	-				-0.9
1,611,821	+				+1.7
1,611,869	+				-0.6
1,611,869	+				+0.4
1,611,869	+				-1.9
1,611,870	-				+1.0
1,611,870	-				+0.4
1,611,870	-				-1.2
1,611,870	-				-0.6
1,611,870	-				-0.2
1,612,052	-		Sama_1323	0.22	-0.6
1,612,104	+		Sama_1323	0.28	-0.9
1,612,105	-		Sama_1323	0.29	-1.6
1,612,105	-		Sama_1323	0.29	+1.0
1,612,117	-		Sama_1323	0.30	-0.1
1,612,117	-		Sama_1323	0.30	+0.2
1,612,159	+		Sama_1323	0.36	+0.4
1,612,214	+		Sama_1323	0.43	+1.7
1,612,214	+		Sama_1323	0.43	+1.0
1,612,215	-		Sama_1323	0.43	-0.9
1,612,215	-		Sama_1323	0.43	+0.4
1,612,215	-		Sama_1323	0.43	-1.6
1,612,225	+		Sama_1323	0.44	-0.5
1,612,225	+		Sama_1323	0.44	+0.4
1,612,252	+		Sama_1323	0.48	-0.6
1,612,329	-		Sama_1323	0.57	-0.3
1,612,376	+		Sama_1323	0.64	-0.9
1,612,377	-		Sama_1323	0.64	+0.5
1,612,377	-		Sama_1323	0.64	-0.4
1,612,492	+		Sama_1323	0.79	-0.4
1,612,492	+		Sama_1323	0.79	+0.3
1,612,493	-		Sama_1323	0.79	-0.6
1,612,493	-		Sama_1323	0.79	-0.8
1,612,526	+		Sama_1323	0.83	+0.1
1,612,555	+		Sama_1323	0.87	-0.0
1,612,653	-				-0.5
1,612,653	-				+1.1
1,612,657	+				+1.4
1,612,657	+				-0.5
1,612,658	-				+0.2
1,612,658	-				-1.8
1,612,658	-				-0.9
1,612,658	-				-0.0
1,612,658	-				-2.7
1,612,658	-				-0.1
1,612,658	-				-1.2
1,612,693	-				+0.7
1,612,697	+				-0.2
1,612,698	-				-0.5
1,612,710	+				-0.8
1,612,710	+				-1.2
1,612,711	-				-0.4
1,612,711	-				+0.1
1,612,711	-				-0.1
1,612,715	+				+0.8
1,612,715	+				+0.5
1,612,715	+				-0.7
1,612,715	+				-0.7
1,612,716	-				+0.3
1,612,716	-				-1.0
1,612,716	-				+0.3
1,612,716	-				-2.1
1,612,716	-				+0.6
1,612,716	-				-0.7
1,612,716	-				-0.1
1,612,716	-				-0.1
1,612,716	-				+1.0
1,612,716	-				-0.4
1,612,716	-				-0.1
1,612,716	-				+1.4
1,612,716	-				+0.1
1,612,716	-				-1.3
1,612,719	+				+0.2
1,612,719	+				-0.2
1,612,719	+				-1.6
1,612,719	+				-0.2
1,612,720	-				-0.7
1,612,720	-				-1.1
1,612,720	-				+0.0
1,612,720	-				+1.1
1,612,720	-				+0.9
1,612,774	-				+1.0
1,612,802	+				-0.1
1,612,803	-				-2.5
1,612,805	+				-0.2
1,612,805	+				-1.4
1,612,820	+				-0.2
1,612,824	+				+0.2
1,612,834	-				-0.8
1,612,834	-				-1.8