Strain Fitness in Shewanella amazonensis SB2B around Sama_1138

Experiment: D-Cycloserine 0.03125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.03125 mg/ml
1,387,192	+		Sama_1137	0.62	-0.5
1,387,193	-		Sama_1137	0.62	-1.3
1,387,195	-		Sama_1137	0.62	-1.1
1,387,195	-		Sama_1137	0.62	-0.8
1,387,195	-		Sama_1137	0.62	-1.3
1,387,195	-		Sama_1137	0.62	-0.7
1,387,225	+		Sama_1137	0.63	-1.1
1,387,504	+		Sama_1137	0.74	-1.3
1,387,827	+		Sama_1137	0.86	-1.3
1,387,833	+		Sama_1137	0.87	-1.1
1,388,189	-				-0.4
1,389,006	-				-0.0
1,389,006	-				+0.7
1,389,006	-				-1.5
1,389,006	-				+0.7
1,389,006	-				+0.2
1,389,006	-				+1.8
1,389,009	-				-1.5
1,389,009	-				+1.7
1,389,009	-				-2.1
1,389,009	-				+1.7
1,389,040	-				+0.0
1,389,040	-				+0.9