Strain Fitness in Shewanella oneidensis MR-1 around SO1166

Experiment: A22 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.01 mg/ml
1,207,729	-				+0.7
1,207,746	-				-0.2
1,207,809	+		SO1165	0.14	-2.8
1,207,910	+		SO1165	0.26	-1.0
1,207,949	-		SO1165	0.31	-0.4
1,208,027	+		SO1165	0.40	-0.2
1,208,040	-		SO1165	0.41	-0.8
1,208,118	+		SO1165	0.51	-1.7
1,208,128	+		SO1165	0.52	-0.7
1,208,130	-		SO1165	0.52	-1.5
1,208,186	+		SO1165	0.59	-1.6
1,208,194	-		SO1165	0.60	-0.6
1,208,196	+		SO1165	0.60	-0.3
1,208,238	-		SO1165	0.65	-1.6
1,208,301	+		SO1165	0.72	-0.6
1,208,302	-		SO1165	0.72	-0.8
1,208,302	-		SO1165	0.72	-0.8
1,208,370	+		SO1165	0.80	-0.5
1,208,956	-		SO1166	0.41	-0.8
1,208,963	-		SO1166	0.41	-0.6
1,208,994	+		SO1166	0.44	-0.7
1,209,002	-		SO1166	0.45	-1.0
1,209,032	-		SO1166	0.48	-0.5
1,209,060	-		SO1166	0.51	-0.7
1,209,098	+		SO1166	0.54	-0.9
1,209,106	-		SO1166	0.55	+0.1
1,209,462	-		SO1166	0.88	-2.8
1,209,477	-		SO1166	0.90	-2.4
1,209,495	-				-0.6
1,209,500	-				-1.2
1,209,537	-				-1.0
1,209,628	-				-0.7