Experiment: A22 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SO0840 and SO0841 are separated by 166 nucleotides SO0841 and fusA-2 are separated by 438 nucleotides
SO0840: SO0840 - acetyl-CoA carboxylase multifunctional enzyme accADC, carboxyl transferase subunit alpha/carboxyl transferase subunit beta/biotin carboxylase (NCBI ptt file), at 856,575 to 861,128
SO0840
SO0841: SO0841 - GGDEF domain protein (NCBI ptt file), at 861,295 to 862,764
SO0841
SO0842: fusA-2 - translation elongation factor G (NCBI ptt file), at 863,203 to 865,296
fusA-2
Position (kb) 861
862
863 Strain fitness (log2 ratio) -1
0
1
2 at 861.194 kb on + strand at 861.317 kb on - strand at 861.355 kb on + strand at 861.368 kb on + strand at 861.390 kb on - strand at 861.470 kb on - strand, within SO0841 at 861.501 kb on - strand, within SO0841 at 861.524 kb on - strand, within SO0841 at 861.611 kb on + strand, within SO0841 at 861.752 kb on + strand, within SO0841 at 861.752 kb on + strand, within SO0841 at 861.760 kb on - strand, within SO0841 at 861.762 kb on + strand, within SO0841 at 861.770 kb on - strand, within SO0841 at 861.770 kb on - strand, within SO0841 at 861.770 kb on - strand, within SO0841 at 861.770 kb on - strand, within SO0841 at 861.770 kb on - strand, within SO0841 at 861.844 kb on + strand, within SO0841 at 861.846 kb on + strand, within SO0841 at 861.846 kb on + strand, within SO0841 at 861.846 kb on + strand, within SO0841 at 861.846 kb on + strand, within SO0841 at 861.846 kb on + strand, within SO0841 at 861.846 kb on + strand, within SO0841 at 861.846 kb on + strand, within SO0841 at 861.846 kb on + strand, within SO0841 at 861.846 kb on + strand, within SO0841 at 861.846 kb on + strand, within SO0841 at 861.846 kb on + strand, within SO0841 at 861.846 kb on + strand, within SO0841 at 861.853 kb on - strand, within SO0841 at 861.853 kb on - strand, within SO0841 at 861.854 kb on - strand, within SO0841 at 861.854 kb on - strand, within SO0841 at 861.854 kb on - strand, within SO0841 at 861.854 kb on - strand, within SO0841 at 861.854 kb on - strand, within SO0841 at 861.854 kb on - strand, within SO0841 at 861.854 kb on - strand, within SO0841 at 861.854 kb on - strand, within SO0841 at 861.854 kb on - strand, within SO0841 at 861.864 kb on - strand, within SO0841 at 861.874 kb on + strand, within SO0841 at 861.925 kb on + strand, within SO0841 at 861.933 kb on - strand, within SO0841 at 861.933 kb on - strand, within SO0841 at 862.054 kb on - strand, within SO0841 at 862.109 kb on - strand, within SO0841 at 862.126 kb on + strand, within SO0841 at 862.176 kb on - strand, within SO0841 at 862.221 kb on + strand, within SO0841 at 862.221 kb on + strand, within SO0841 at 862.221 kb on + strand, within SO0841 at 862.259 kb on - strand, within SO0841 at 862.280 kb on + strand, within SO0841 at 862.280 kb on + strand, within SO0841 at 862.288 kb on - strand, within SO0841 at 862.346 kb on + strand, within SO0841 at 862.366 kb on + strand, within SO0841 at 862.410 kb on + strand, within SO0841 at 862.417 kb on - strand, within SO0841 at 862.429 kb on - strand, within SO0841 at 862.429 kb on - strand, within SO0841 at 862.429 kb on - strand, within SO0841 at 862.460 kb on + strand, within SO0841 at 862.461 kb on + strand, within SO0841 at 862.469 kb on - strand, within SO0841 at 862.469 kb on - strand, within SO0841 at 862.561 kb on + strand, within SO0841 at 862.569 kb on - strand, within SO0841 at 862.637 kb on + strand at 862.667 kb on + strand at 862.675 kb on - strand at 862.685 kb on - strand at 862.881 kb on - strand at 862.907 kb on + strand at 862.917 kb on + strand at 862.925 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction A22 0.01 mg/ml remove 861,194 + +0.6 861,317 - +0.1 861,355 + +0.4 861,368 + +0.3 861,390 - +0.5 861,470 - SO0841 0.12 -0.6 861,501 - SO0841 0.14 -0.0 861,524 - SO0841 0.16 +0.4 861,611 + SO0841 0.21 -0.1 861,752 + SO0841 0.31 -0.3 861,752 + SO0841 0.31 +0.1 861,760 - SO0841 0.32 +0.0 861,762 + SO0841 0.32 -0.6 861,770 - SO0841 0.32 +0.6 861,770 - SO0841 0.32 -0.7 861,770 - SO0841 0.32 +0.7 861,770 - SO0841 0.32 -0.0 861,770 - SO0841 0.32 +0.3 861,844 + SO0841 0.37 -0.4 861,846 + SO0841 0.37 +0.0 861,846 + SO0841 0.37 +0.0 861,846 + SO0841 0.37 +0.5 861,846 + SO0841 0.37 -0.6 861,846 + SO0841 0.37 -0.6 861,846 + SO0841 0.37 -0.7 861,846 + SO0841 0.37 -0.6 861,846 + SO0841 0.37 -0.8 861,846 + SO0841 0.37 +0.2 861,846 + SO0841 0.37 +0.2 861,846 + SO0841 0.37 -0.4 861,846 + SO0841 0.37 -0.6 861,853 - SO0841 0.38 +1.3 861,853 - SO0841 0.38 -0.2 861,854 - SO0841 0.38 +0.0 861,854 - SO0841 0.38 -1.1 861,854 - SO0841 0.38 -0.4 861,854 - SO0841 0.38 +0.1 861,854 - SO0841 0.38 -0.2 861,854 - SO0841 0.38 +0.1 861,854 - SO0841 0.38 -0.0 861,854 - SO0841 0.38 +0.3 861,854 - SO0841 0.38 -0.1 861,864 - SO0841 0.39 -1.1 861,874 + SO0841 0.39 -1.5 861,925 + SO0841 0.43 +0.3 861,933 - SO0841 0.43 -0.4 861,933 - SO0841 0.43 -0.6 862,054 - SO0841 0.52 -0.6 862,109 - SO0841 0.55 +0.3 862,126 + SO0841 0.57 -0.0 862,176 - SO0841 0.60 +0.4 862,221 + SO0841 0.63 -0.1 862,221 + SO0841 0.63 -0.5 862,221 + SO0841 0.63 -0.1 862,259 - SO0841 0.66 -0.4 862,280 + SO0841 0.67 -0.1 862,280 + SO0841 0.67 -0.6 862,288 - SO0841 0.68 -0.3 862,346 + SO0841 0.71 +0.1 862,366 + SO0841 0.73 -0.5 862,410 + SO0841 0.76 -0.7 862,417 - SO0841 0.76 -0.1 862,429 - SO0841 0.77 +2.0 862,429 - SO0841 0.77 -0.1 862,429 - SO0841 0.77 -1.3 862,460 + SO0841 0.79 -0.2 862,461 + SO0841 0.79 +0.8 862,469 - SO0841 0.80 -0.8 862,469 - SO0841 0.80 +1.0 862,561 + SO0841 0.86 -0.1 862,569 - SO0841 0.87 -0.7 862,637 + -1.2 862,667 + -0.2 862,675 - +0.2 862,685 - +0.0 862,881 - -0.0 862,907 + +0.5 862,917 + -0.4 862,925 - -0.8
Or see this region's nucleotide sequence