Strain Fitness in Phaeobacter inhibens DSM 17395

Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c32490

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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Per-strain Table

Position	Strand	LocusTag	Fraction	casaminos (C)
				remove
3,406,061	-			-0.5
3,406,085	+			+0.4
3,406,085	+			+0.8
3,406,096	+			+1.1
3,406,169	-	PGA1_c32480	0.17	+0.4
3,406,208	-	PGA1_c32480	0.21	-0.5
3,406,223	-	PGA1_c32480	0.23	-0.1
3,406,255	+	PGA1_c32480	0.27	+0.1
3,406,255	+	PGA1_c32480	0.27	-0.9
3,406,258	-	PGA1_c32480	0.27	+0.4
3,406,263	-	PGA1_c32480	0.28	-0.5
3,406,283	-	PGA1_c32480	0.30	+1.7
3,406,294	-	PGA1_c32480	0.31	-0.0
3,406,302	-	PGA1_c32480	0.32	-0.7
3,406,311	+	PGA1_c32480	0.33	+0.0
3,406,335	+	PGA1_c32480	0.36	+0.5
3,406,335	+	PGA1_c32480	0.36	-0.2
3,406,353	-	PGA1_c32480	0.38	+0.4
3,406,353	-	PGA1_c32480	0.38	+0.1
3,406,358	-	PGA1_c32480	0.39	-0.3
3,406,417	+	PGA1_c32480	0.46	-0.6
3,406,417	+	PGA1_c32480	0.46	-0.2
3,406,417	+	PGA1_c32480	0.46	-0.3
3,406,425	-	PGA1_c32480	0.46	-1.3
3,406,425	-	PGA1_c32480	0.46	-0.1
3,406,425	-	PGA1_c32480	0.46	+0.6
3,406,425	-	PGA1_c32480	0.46	+0.8
3,406,425	-	PGA1_c32480	0.46	+0.1
3,406,425	-	PGA1_c32480	0.46	-0.4
3,406,436	-	PGA1_c32480	0.48	-2.7
3,406,500	+	PGA1_c32480	0.55	+0.5
3,406,571	-	PGA1_c32480	0.63	-1.6
3,406,590	-	PGA1_c32480	0.66	+0.6
3,406,592	-	PGA1_c32480	0.66	+0.4
3,406,596	-	PGA1_c32480	0.66	+0.9
3,406,611	+	PGA1_c32480	0.68	-1.0
3,406,611	+	PGA1_c32480	0.68	-0.3
3,406,611	+	PGA1_c32480	0.68	-0.3
3,406,611	+	PGA1_c32480	0.68	-0.1
3,406,611	+	PGA1_c32480	0.68	-0.3
3,406,619	-	PGA1_c32480	0.69	-1.8
3,406,713	+	PGA1_c32480	0.80	+0.6
3,406,713	+	PGA1_c32480	0.80	-1.2
3,406,713	+	PGA1_c32480	0.80	-0.3
3,406,721	-	PGA1_c32480	0.81	+0.7
3,406,741	+	PGA1_c32480	0.83	+0.5
3,406,741	+	PGA1_c32480	0.83	+1.1
3,406,756	+	PGA1_c32480	0.85	+0.4
3,406,801	+			+0.5
3,406,811	+			-0.5
3,406,889	+			-1.1
3,406,889	+			+0.8
3,406,897	-			-0.2
3,406,897	-			-0.6
3,406,897	-			+0.6
3,406,947	-			+0.4
3,407,337	+			-2.9
3,407,404	-			-2.3
3,407,411	-			-2.3
3,407,487	-			-3.3
3,407,487	-			+0.4
3,407,487	-			-1.5
3,407,487	-			-1.3
3,407,502	-			-0.2
3,407,507	-			+0.9
3,407,517	+			-0.5
3,407,517	+			-0.3
3,407,517	+			-2.1
3,407,520	-			-1.2
3,407,544	+			-0.0
3,407,556	-			-0.4
3,407,560	-			+0.3
3,407,560	-			-3.1
3,407,601	-			-1.0
3,407,630	+			-1.7
3,407,637	+			-0.2
3,407,645	-			+0.1
3,407,645	-			-0.8
3,407,655	+			-1.0
3,407,708	+	PGA1_c32510	0.15	-0.2
3,407,716	-	PGA1_c32510	0.16	+0.8
3,407,804	+	PGA1_c32510	0.24	+0.8
3,407,804	+	PGA1_c32510	0.24	-0.4
3,407,804	+	PGA1_c32510	0.24	+0.9
3,407,804	+	PGA1_c32510	0.24	+1.3
3,407,804	+	PGA1_c32510	0.24	-3.3
3,407,804	+	PGA1_c32510	0.24	+0.4
3,407,804	+	PGA1_c32510	0.24	-0.5
3,407,804	+	PGA1_c32510	0.24	+0.7
3,407,804	+	PGA1_c32510	0.24	+0.7
3,407,804	+	PGA1_c32510	0.24	-2.7
3,407,804	+	PGA1_c32510	0.24	-0.0
3,407,804	+	PGA1_c32510	0.24	-1.6
3,407,804	+	PGA1_c32510	0.24	-0.4
3,407,804	+	PGA1_c32510	0.24	-1.6
3,407,804	+	PGA1_c32510	0.24	-0.4
3,407,804	+	PGA1_c32510	0.24	+0.1
3,407,804	+	PGA1_c32510	0.24	+0.1
3,407,804	+	PGA1_c32510	0.24	+0.8
3,407,804	+	PGA1_c32510	0.24	-0.6
3,407,804	+	PGA1_c32510	0.24	-2.8
3,407,804	+	PGA1_c32510	0.24	+0.4
3,407,804	+	PGA1_c32510	0.24	-1.3
3,407,804	+	PGA1_c32510	0.24	-0.2
3,407,804	+	PGA1_c32510	0.24	+1.7
3,407,804	+	PGA1_c32510	0.24	-0.4
3,407,804	+	PGA1_c32510	0.24	-1.0
3,407,804	+	PGA1_c32510	0.24	+1.1
3,407,804	+	PGA1_c32510	0.24	-0.4
3,407,804	+	PGA1_c32510	0.24	+0.4
3,407,804	+	PGA1_c32510	0.24	-0.3
3,407,804	+	PGA1_c32510	0.24	+0.1
3,407,804	+	PGA1_c32510	0.24	-0.3
3,407,804	+	PGA1_c32510	0.24	-1.0
3,407,804	+	PGA1_c32510	0.24	-0.1
3,407,804	+	PGA1_c32510	0.24	+0.4
3,407,804	+	PGA1_c32510	0.24	+1.0
3,407,804	+	PGA1_c32510	0.24	+0.3
3,407,804	+	PGA1_c32510	0.24	-0.1
3,407,804	+	PGA1_c32510	0.24	-0.2
3,407,804	+	PGA1_c32510	0.24	-1.3
3,407,804	+	PGA1_c32510	0.24	-0.0
3,407,804	+	PGA1_c32510	0.24	-2.4
3,407,804	+	PGA1_c32510	0.24	+0.3
3,407,804	+	PGA1_c32510	0.24	+0.8
3,407,804	+	PGA1_c32510	0.24	-0.2
3,407,804	+	PGA1_c32510	0.24	+0.9
3,407,804	+	PGA1_c32510	0.24	+0.2
3,407,804	+	PGA1_c32510	0.24	+0.4
3,407,804	+	PGA1_c32510	0.24	-0.4
3,407,804	+	PGA1_c32510	0.24	-0.3
3,407,804	+	PGA1_c32510	0.24	-0.9
3,407,804	+	PGA1_c32510	0.24	+1.1
3,407,804	+	PGA1_c32510	0.24	-1.0
3,407,804	+	PGA1_c32510	0.24	+0.0
3,407,804	+	PGA1_c32510	0.24	-1.0
3,407,804	+	PGA1_c32510	0.24	+0.2
3,407,804	+	PGA1_c32510	0.24	-0.1
3,407,804	+	PGA1_c32510	0.24	-0.3
3,407,804	+	PGA1_c32510	0.24	-0.7
3,407,804	+	PGA1_c32510	0.24	-1.6
3,407,804	+	PGA1_c32510	0.24	+0.0
3,407,804	+	PGA1_c32510	0.24	-1.0
3,407,804	+	PGA1_c32510	0.24	-3.0
3,407,804	+	PGA1_c32510	0.24	-1.2
3,407,804	+	PGA1_c32510	0.24	-1.7
3,407,804	+	PGA1_c32510	0.24	-0.4
3,407,804	+	PGA1_c32510	0.24	-0.6
3,407,804	+	PGA1_c32510	0.24	+0.0
3,407,804	+	PGA1_c32510	0.24	+0.0
3,407,804	+	PGA1_c32510	0.24	+0.9
3,407,804	+	PGA1_c32510	0.24	+1.2
3,407,804	+	PGA1_c32510	0.24	+0.5
3,407,804	+	PGA1_c32510	0.24	-0.5
3,407,804	+	PGA1_c32510	0.24	-1.6
3,407,804	+	PGA1_c32510	0.24	-0.4
3,407,804	+	PGA1_c32510	0.24	-1.6
3,407,804	+	PGA1_c32510	0.24	+0.2
3,407,804	+	PGA1_c32510	0.24	-0.4
3,407,804	+	PGA1_c32510	0.24	+0.5
3,407,804	+	PGA1_c32510	0.24	+0.1
3,407,804	+	PGA1_c32510	0.24	+0.8
3,407,804	+	PGA1_c32510	0.24	-0.3
3,407,804	+	PGA1_c32510	0.24	+1.0
3,407,804	+	PGA1_c32510	0.24	+0.8
3,407,804	+	PGA1_c32510	0.24	-0.3
3,407,804	+	PGA1_c32510	0.24	-0.5
3,407,804	+	PGA1_c32510	0.24	+0.2
3,407,804	+	PGA1_c32510	0.24	-0.0
3,407,804	+	PGA1_c32510	0.24	-1.8
3,407,812	-	PGA1_c32510	0.25	-0.4
3,407,812	-	PGA1_c32510	0.25	-0.3
3,407,812	-	PGA1_c32510	0.25	+1.0
3,407,812	-	PGA1_c32510	0.25	-2.4
3,407,812	-	PGA1_c32510	0.25	-1.1
3,407,812	-	PGA1_c32510	0.25	+0.0
3,407,812	-	PGA1_c32510	0.25	+0.1
3,407,812	-	PGA1_c32510	0.25	-2.4
3,407,812	-	PGA1_c32510	0.25	-0.0
3,407,812	-	PGA1_c32510	0.25	+1.2
3,407,812	-	PGA1_c32510	0.25	+0.4
3,407,812	-	PGA1_c32510	0.25	-1.4
3,407,812	-	PGA1_c32510	0.25	-0.4
3,407,812	-	PGA1_c32510	0.25	-0.3
3,407,812	-	PGA1_c32510	0.25	-0.4
3,407,812	-	PGA1_c32510	0.25	-0.6
3,407,812	-	PGA1_c32510	0.25	+0.6
3,407,812	-	PGA1_c32510	0.25	-1.3
3,407,812	-	PGA1_c32510	0.25	-1.0
3,407,812	-	PGA1_c32510	0.25	-0.9
3,407,812	-	PGA1_c32510	0.25	+1.1
3,407,812	-	PGA1_c32510	0.25	-1.8
3,407,812	-	PGA1_c32510	0.25	+0.4
3,407,812	-	PGA1_c32510	0.25	+0.1
3,407,812	-	PGA1_c32510	0.25	-0.6
3,407,812	-	PGA1_c32510	0.25	-0.9
3,407,812	-	PGA1_c32510	0.25	-0.2
3,407,812	-	PGA1_c32510	0.25	-2.1
3,407,812	-	PGA1_c32510	0.25	+0.4
3,407,812	-	PGA1_c32510	0.25	-0.4
3,407,812	-	PGA1_c32510	0.25	-0.0
3,407,812	-	PGA1_c32510	0.25	+1.1
3,407,812	-	PGA1_c32510	0.25	+0.6
3,407,812	-	PGA1_c32510	0.25	-0.0
3,407,812	-	PGA1_c32510	0.25	-1.5
3,407,812	-	PGA1_c32510	0.25	-0.8
3,407,812	-	PGA1_c32510	0.25	+0.1
3,407,812	-	PGA1_c32510	0.25	+0.9
3,407,812	-	PGA1_c32510	0.25	-0.1
3,407,812	-	PGA1_c32510	0.25	-1.2
3,407,812	-	PGA1_c32510	0.25	+1.4
3,407,812	-	PGA1_c32510	0.25	-2.3
3,407,812	-	PGA1_c32510	0.25	-0.8
3,407,812	-	PGA1_c32510	0.25	+0.7
3,407,812	-	PGA1_c32510	0.25	+0.1
3,407,812	-	PGA1_c32510	0.25	-0.6
3,407,812	-	PGA1_c32510	0.25	+0.3
3,407,812	-	PGA1_c32510	0.25	+0.7
3,407,812	-	PGA1_c32510	0.25	+0.2
3,407,812	-	PGA1_c32510	0.25	+0.1
3,407,812	-	PGA1_c32510	0.25	-1.4
3,407,812	-	PGA1_c32510	0.25	-0.2
3,407,812	-	PGA1_c32510	0.25	-0.0
3,407,812	-	PGA1_c32510	0.25	-0.6
3,407,812	-	PGA1_c32510	0.25	-0.5
3,407,812	-	PGA1_c32510	0.25	-2.2
3,407,812	-	PGA1_c32510	0.25	-0.6
3,407,812	-	PGA1_c32510	0.25	-2.7
3,407,812	-	PGA1_c32510	0.25	+0.4
3,407,812	-	PGA1_c32510	0.25	-0.9
3,407,812	-	PGA1_c32510	0.25	+0.5
3,407,812	-	PGA1_c32510	0.25	-1.2
3,407,812	-	PGA1_c32510	0.25	+0.3
3,407,812	-	PGA1_c32510	0.25	+0.4
3,407,812	-	PGA1_c32510	0.25	+0.4
3,407,812	-	PGA1_c32510	0.25	+0.0
3,407,812	-	PGA1_c32510	0.25	-0.5
3,407,812	-	PGA1_c32510	0.25	-1.0
3,407,812	-	PGA1_c32510	0.25	-2.6
3,407,812	-	PGA1_c32510	0.25	-1.0
3,407,812	-	PGA1_c32510	0.25	-0.0
3,407,812	-	PGA1_c32510	0.25	-0.7
3,407,812	-	PGA1_c32510	0.25	+0.2
3,407,812	-	PGA1_c32510	0.25	-0.4
3,407,812	-	PGA1_c32510	0.25	-0.1
3,407,812	-	PGA1_c32510	0.25	-0.2
3,407,812	-	PGA1_c32510	0.25	-0.7
3,407,812	-	PGA1_c32510	0.25	+1.1
3,407,812	-	PGA1_c32510	0.25	-0.0
3,407,812	-	PGA1_c32510	0.25	-0.8
3,407,812	-	PGA1_c32510	0.25	+0.0
3,407,812	-	PGA1_c32510	0.25	+0.3
3,407,812	-	PGA1_c32510	0.25	-1.2
3,407,812	-	PGA1_c32510	0.25	+0.0
3,407,812	-	PGA1_c32510	0.25	-0.9
3,407,812	-	PGA1_c32510	0.25	+0.8
3,407,812	-	PGA1_c32510	0.25	+0.6
3,407,812	-	PGA1_c32510	0.25	+2.0
3,407,812	-	PGA1_c32510	0.25	-0.3
3,407,812	-	PGA1_c32510	0.25	+0.4
3,407,812	-	PGA1_c32510	0.25	+1.6
3,407,812	-	PGA1_c32510	0.25	+0.5
3,407,812	-	PGA1_c32510	0.25	+0.5
3,407,812	-	PGA1_c32510	0.25	+0.8
3,407,812	-	PGA1_c32510	0.25	-0.3
3,407,812	-	PGA1_c32510	0.25	+0.1
3,407,812	-	PGA1_c32510	0.25	-0.3
3,407,812	-	PGA1_c32510	0.25	-0.4
3,407,812	-	PGA1_c32510	0.25	-1.7
3,407,812	-	PGA1_c32510	0.25	-2.3
3,407,812	-	PGA1_c32510	0.25	-0.1
3,407,812	-	PGA1_c32510	0.25	+0.7
3,407,812	-	PGA1_c32510	0.25	+1.1
3,407,812	-	PGA1_c32510	0.25	+0.4
3,407,812	-	PGA1_c32510	0.25	-0.0
3,407,812	-	PGA1_c32510	0.25	+1.6
3,407,812	-	PGA1_c32510	0.25	+0.6
3,407,812	-	PGA1_c32510	0.25	-0.7
3,407,812	-	PGA1_c32510	0.25	-2.0
3,407,812	-	PGA1_c32510	0.25	+1.0
3,407,812	-	PGA1_c32510	0.25	+0.3
3,407,812	-	PGA1_c32510	0.25	+0.4
3,407,812	-	PGA1_c32510	0.25	-3.0
3,407,812	-	PGA1_c32510	0.25	-1.6
3,407,812	-	PGA1_c32510	0.25	+0.2
3,407,812	-	PGA1_c32510	0.25	-1.0
3,407,812	-	PGA1_c32510	0.25	-1.3
3,407,812	-	PGA1_c32510	0.25	-0.6
3,407,812	-	PGA1_c32510	0.25	+0.8
3,407,812	-	PGA1_c32510	0.25	+0.1
3,407,812	-	PGA1_c32510	0.25	+0.0
3,407,812	-	PGA1_c32510	0.25	+0.3
3,407,812	-	PGA1_c32510	0.25	+0.3
3,407,812	-	PGA1_c32510	0.25	-0.3
3,407,812	-	PGA1_c32510	0.25	-0.1
3,407,812	-	PGA1_c32510	0.25	+1.0
3,407,812	-	PGA1_c32510	0.25	-0.1
3,407,812	-	PGA1_c32510	0.25	-0.0
3,407,812	-	PGA1_c32510	0.25	+1.1
3,407,812	-	PGA1_c32510	0.25	+0.6
3,407,812	-	PGA1_c32510	0.25	-0.9
3,407,812	-	PGA1_c32510	0.25	+0.1
3,407,812	-	PGA1_c32510	0.25	+0.1
3,407,812	-	PGA1_c32510	0.25	-0.7
3,407,812	-	PGA1_c32510	0.25	+1.7
3,407,812	-	PGA1_c32510	0.25	+0.1
3,407,812	-	PGA1_c32510	0.25	-1.5
3,407,812	-	PGA1_c32510	0.25	-1.7
3,407,812	-	PGA1_c32510	0.25	-1.0
3,407,812	-	PGA1_c32510	0.25	+0.4
3,407,812	-	PGA1_c32510	0.25	+1.7
3,407,812	-	PGA1_c32510	0.25	+0.5
3,407,812	-	PGA1_c32510	0.25	-0.3
3,407,812	-	PGA1_c32510	0.25	-0.2
3,407,812	-	PGA1_c32510	0.25	-1.6
3,407,812	-	PGA1_c32510	0.25	+0.2
3,407,812	-	PGA1_c32510	0.25	-1.6
3,407,812	-	PGA1_c32510	0.25	-0.0
3,407,812	-	PGA1_c32510	0.25	-0.2
3,407,812	-	PGA1_c32510	0.25	-0.2
3,407,812	-	PGA1_c32510	0.25	-2.3
3,407,812	-	PGA1_c32510	0.25	-1.5
3,407,812	-	PGA1_c32510	0.25	+0.0
3,407,812	-	PGA1_c32510	0.25	-0.6
3,407,812	-	PGA1_c32510	0.25	-0.6
3,407,812	-	PGA1_c32510	0.25	-2.3
3,407,812	-	PGA1_c32510	0.25	+0.3
3,407,812	-	PGA1_c32510	0.25	-0.1
3,407,812	-	PGA1_c32510	0.25	-1.5
3,407,812	-	PGA1_c32510	0.25	-0.0
3,407,812	-	PGA1_c32510	0.25	-1.2
3,407,812	-	PGA1_c32510	0.25	-0.7
3,407,812	-	PGA1_c32510	0.25	-0.1
3,407,812	-	PGA1_c32510	0.25	+0.3
3,407,812	-	PGA1_c32510	0.25	-0.0
3,407,812	-	PGA1_c32510	0.25	-0.4
3,407,812	-	PGA1_c32510	0.25	-1.6
3,407,812	-	PGA1_c32510	0.25	-0.3
3,407,812	-	PGA1_c32510	0.25	+0.4
3,407,812	-	PGA1_c32510	0.25	-2.3
3,407,812	-	PGA1_c32510	0.25	-1.0
3,407,812	-	PGA1_c32510	0.25	+0.3
3,407,812	-	PGA1_c32510	0.25	+0.7
3,407,812	-	PGA1_c32510	0.25	-0.6
3,407,812	-	PGA1_c32510	0.25	+1.1
3,407,812	-	PGA1_c32510	0.25	+1.2
3,407,812	-	PGA1_c32510	0.25	-0.9
3,407,812	-	PGA1_c32510	0.25	-0.9
3,407,812	-	PGA1_c32510	0.25	-0.1
3,407,812	-	PGA1_c32510	0.25	-0.3
3,407,812	-	PGA1_c32510	0.25	+0.2
3,407,812	-	PGA1_c32510	0.25	-0.0
3,407,812	-	PGA1_c32510	0.25	-1.0
3,407,812	-	PGA1_c32510	0.25	-3.3
3,407,812	-	PGA1_c32510	0.25	+0.1
3,407,812	-	PGA1_c32510	0.25	-1.0
3,407,812	-	PGA1_c32510	0.25	-0.1
3,407,812	-	PGA1_c32510	0.25	-0.4
3,407,812	-	PGA1_c32510	0.25	+0.0
3,407,812	-	PGA1_c32510	0.25	-1.7
3,407,812	-	PGA1_c32510	0.25	-1.0
3,407,812	-	PGA1_c32510	0.25	-1.2
3,407,812	-	PGA1_c32510	0.25	-2.4
3,407,812	-	PGA1_c32510	0.25	-2.4
3,407,812	-	PGA1_c32510	0.25	+0.3
3,407,812	-	PGA1_c32510	0.25	-1.2
3,407,812	-	PGA1_c32510	0.25	-3.9
3,407,812	-	PGA1_c32510	0.25	-3.0
3,407,812	-	PGA1_c32510	0.25	-0.9
3,407,812	-	PGA1_c32510	0.25	-0.5
3,407,812	-	PGA1_c32510	0.25	-1.0
3,407,812	-	PGA1_c32510	0.25	+0.3
3,407,812	-	PGA1_c32510	0.25	-1.5
3,407,812	-	PGA1_c32510	0.25	-0.4
3,407,812	-	PGA1_c32510	0.25	+1.5
3,407,812	-	PGA1_c32510	0.25	+0.2
3,407,812	-	PGA1_c32510	0.25	+0.5
3,407,812	-	PGA1_c32510	0.25	+1.7
3,407,812	-	PGA1_c32510	0.25	-0.9
3,407,812	-	PGA1_c32510	0.25	-1.2
3,407,812	-	PGA1_c32510	0.25	-1.8
3,408,010	+	PGA1_c32510	0.45	+0.3
3,408,010	+	PGA1_c32510	0.45	+0.4
3,408,010	+	PGA1_c32510	0.45	-0.5
3,408,010	+	PGA1_c32510	0.45	-0.5
3,408,018	-	PGA1_c32510	0.45	+0.2
3,408,018	-	PGA1_c32510	0.45	-1.7
3,408,068	-	PGA1_c32510	0.50	-1.4
3,408,113	-	PGA1_c32510	0.55	+1.0

Or see this region's nucleotide sequence