Experiment: Chlorite 0.06 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_3815 and Psest_3816 are separated by 115 nucleotides Psest_3816 and Psest_3817 are separated by 60 nucleotides Psest_3817 and Psest_3818 are separated by 104 nucleotides Psest_3818 and Psest_3819 are separated by 43 nucleotides
Psest_3815: Psest_3815 - guanylate kinase, at 3,985,421 to 3,986,041
_3815
Psest_3816: Psest_3816 - DNA-directed RNA polymerase, omega subunit, at 3,986,157 to 3,986,420
_3816
Psest_3817: Psest_3817 - (p)ppGpp synthetase, RelA/SpoT family, at 3,986,481 to 3,988,589
_3817
Psest_3818: Psest_3818 - endoribonuclease L-PSP, putative, at 3,988,694 to 3,989,074
_3818
Psest_3819: Psest_3819 - Outer membrane protein and related peptidoglycan-associated (lipo)proteins, at 3,989,118 to 3,989,690
_3819
Position (kb)
3986
3987
3988
3989 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3986.040 kb on - strand at 3986.097 kb on + strand at 3986.102 kb on + strand at 3986.337 kb on + strand, within Psest_3816 at 3986.337 kb on + strand, within Psest_3816 at 3988.655 kb on - strand at 3988.745 kb on + strand, within Psest_3818 at 3988.745 kb on + strand, within Psest_3818 at 3988.746 kb on - strand, within Psest_3818 at 3988.746 kb on - strand, within Psest_3818 at 3988.746 kb on - strand, within Psest_3818 at 3988.746 kb on - strand, within Psest_3818 at 3988.746 kb on - strand, within Psest_3818 at 3988.771 kb on + strand, within Psest_3818 at 3988.778 kb on + strand, within Psest_3818 at 3988.778 kb on + strand, within Psest_3818 at 3988.778 kb on + strand, within Psest_3818 at 3988.778 kb on + strand, within Psest_3818 at 3988.779 kb on - strand, within Psest_3818 at 3988.779 kb on - strand, within Psest_3818 at 3988.779 kb on - strand, within Psest_3818 at 3989.083 kb on + strand at 3989.083 kb on + strand at 3989.084 kb on - strand at 3989.084 kb on - strand at 3989.144 kb on + strand at 3989.247 kb on + strand, within Psest_3819 at 3989.248 kb on - strand, within Psest_3819
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 0.06 mM remove 3,986,040 - +0.2 3,986,097 + -0.5 3,986,102 + +0.9 3,986,337 + Psest_3816 0.68 -0.9 3,986,337 + Psest_3816 0.68 -3.3 3,988,655 - -0.5 3,988,745 + Psest_3818 0.13 +2.1 3,988,745 + Psest_3818 0.13 -0.8 3,988,746 - Psest_3818 0.14 +0.8 3,988,746 - Psest_3818 0.14 -0.1 3,988,746 - Psest_3818 0.14 -0.1 3,988,746 - Psest_3818 0.14 -0.1 3,988,746 - Psest_3818 0.14 +0.9 3,988,771 + Psest_3818 0.20 +0.6 3,988,778 + Psest_3818 0.22 -0.1 3,988,778 + Psest_3818 0.22 -0.9 3,988,778 + Psest_3818 0.22 -0.1 3,988,778 + Psest_3818 0.22 -0.4 3,988,779 - Psest_3818 0.22 +0.7 3,988,779 - Psest_3818 0.22 +0.1 3,988,779 - Psest_3818 0.22 +0.2 3,989,083 + -0.1 3,989,083 + -0.3 3,989,084 - -0.5 3,989,084 - -0.1 3,989,144 + -0.4 3,989,247 + Psest_3819 0.23 -1.2 3,989,248 - Psest_3819 0.23 -0.1
Or see this region's nucleotide sequence