Experiment: Chlorite 0.06 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2140 and Psest_2141 overlap by 4 nucleotides Psest_2141 and Psest_2142 are separated by 58 nucleotides
Psest_2140: Psest_2140 - Cation/multidrug efflux pump, at 2,279,844 to 2,282,948
_2140
Psest_2141: Psest_2141 - efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family, at 2,282,945 to 2,284,432
_2141
Psest_2142: Psest_2142 - tripartite ATP-independent periplasmic transporter solute receptor, DctP family, at 2,284,491 to 2,285,483
_2142
Position (kb)
2282
2283
2284
2285 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2282.071 kb on - strand, within Psest_2140 at 2282.071 kb on - strand, within Psest_2140 at 2282.119 kb on - strand, within Psest_2140 at 2282.442 kb on + strand, within Psest_2140 at 2282.442 kb on + strand, within Psest_2140 at 2282.443 kb on - strand, within Psest_2140 at 2282.443 kb on - strand, within Psest_2140 at 2282.443 kb on - strand, within Psest_2140 at 2282.443 kb on - strand, within Psest_2140 at 2282.443 kb on - strand, within Psest_2140 at 2282.472 kb on + strand, within Psest_2140 at 2282.472 kb on + strand, within Psest_2140 at 2282.472 kb on + strand, within Psest_2140 at 2282.472 kb on + strand, within Psest_2140 at 2282.847 kb on + strand at 2282.847 kb on + strand at 2282.865 kb on + strand at 2282.865 kb on + strand at 2282.865 kb on + strand at 2282.865 kb on + strand at 2282.865 kb on + strand at 2282.865 kb on + strand at 2282.866 kb on - strand at 2282.866 kb on - strand at 2283.051 kb on - strand at 2283.349 kb on + strand, within Psest_2141 at 2283.352 kb on + strand, within Psest_2141 at 2283.352 kb on + strand, within Psest_2141 at 2283.353 kb on - strand, within Psest_2141 at 2283.381 kb on - strand, within Psest_2141 at 2283.461 kb on - strand, within Psest_2141 at 2283.527 kb on + strand, within Psest_2141 at 2283.528 kb on - strand, within Psest_2141 at 2283.528 kb on - strand, within Psest_2141 at 2283.587 kb on + strand, within Psest_2141 at 2283.964 kb on + strand, within Psest_2141 at 2283.964 kb on + strand, within Psest_2141 at 2283.965 kb on - strand, within Psest_2141 at 2283.965 kb on - strand, within Psest_2141 at 2284.082 kb on + strand, within Psest_2141 at 2284.145 kb on + strand, within Psest_2141 at 2284.444 kb on + strand at 2284.784 kb on + strand, within Psest_2142 at 2284.785 kb on - strand, within Psest_2142 at 2284.785 kb on - strand, within Psest_2142 at 2284.785 kb on - strand, within Psest_2142 at 2284.785 kb on - strand, within Psest_2142 at 2284.785 kb on - strand, within Psest_2142 at 2284.786 kb on + strand, within Psest_2142 at 2284.786 kb on + strand, within Psest_2142 at 2284.786 kb on + strand, within Psest_2142 at 2284.786 kb on + strand, within Psest_2142 at 2284.786 kb on + strand, within Psest_2142 at 2284.786 kb on + strand, within Psest_2142 at 2284.786 kb on + strand, within Psest_2142 at 2284.786 kb on + strand, within Psest_2142 at 2284.787 kb on - strand, within Psest_2142 at 2284.787 kb on - strand, within Psest_2142 at 2284.787 kb on - strand, within Psest_2142 at 2284.787 kb on - strand, within Psest_2142 at 2284.787 kb on - strand, within Psest_2142 at 2284.787 kb on - strand, within Psest_2142 at 2284.817 kb on + strand, within Psest_2142 at 2284.818 kb on - strand, within Psest_2142 at 2284.818 kb on - strand, within Psest_2142 at 2284.819 kb on + strand, within Psest_2142 at 2284.819 kb on + strand, within Psest_2142 at 2284.819 kb on + strand, within Psest_2142 at 2284.820 kb on - strand, within Psest_2142 at 2284.820 kb on - strand, within Psest_2142 at 2284.820 kb on - strand, within Psest_2142 at 2284.820 kb on - strand, within Psest_2142 at 2284.849 kb on + strand, within Psest_2142 at 2284.849 kb on + strand, within Psest_2142 at 2284.849 kb on + strand, within Psest_2142 at 2284.849 kb on + strand, within Psest_2142 at 2284.849 kb on + strand, within Psest_2142 at 2284.849 kb on + strand, within Psest_2142 at 2284.850 kb on - strand, within Psest_2142 at 2284.850 kb on - strand, within Psest_2142 at 2284.850 kb on - strand, within Psest_2142 at 2284.850 kb on - strand, within Psest_2142 at 2284.850 kb on - strand, within Psest_2142 at 2284.850 kb on - strand, within Psest_2142 at 2284.850 kb on - strand, within Psest_2142 at 2284.881 kb on + strand, within Psest_2142 at 2284.881 kb on + strand, within Psest_2142 at 2284.881 kb on + strand, within Psest_2142 at 2284.934 kb on + strand, within Psest_2142 at 2284.934 kb on + strand, within Psest_2142 at 2284.935 kb on - strand, within Psest_2142 at 2285.066 kb on - strand, within Psest_2142 at 2285.078 kb on + strand, within Psest_2142 at 2285.200 kb on + strand, within Psest_2142 at 2285.200 kb on + strand, within Psest_2142 at 2285.200 kb on + strand, within Psest_2142 at 2285.200 kb on + strand, within Psest_2142 at 2285.201 kb on - strand, within Psest_2142 at 2285.201 kb on - strand, within Psest_2142 at 2285.391 kb on + strand at 2285.391 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 0.06 mM remove 2,282,071 - Psest_2140 0.72 -0.4 2,282,071 - Psest_2140 0.72 +0.5 2,282,119 - Psest_2140 0.73 -1.1 2,282,442 + Psest_2140 0.84 -0.1 2,282,442 + Psest_2140 0.84 -1.1 2,282,443 - Psest_2140 0.84 -1.9 2,282,443 - Psest_2140 0.84 -1.8 2,282,443 - Psest_2140 0.84 -1.1 2,282,443 - Psest_2140 0.84 -1.7 2,282,443 - Psest_2140 0.84 -0.5 2,282,472 + Psest_2140 0.85 +0.1 2,282,472 + Psest_2140 0.85 -1.6 2,282,472 + Psest_2140 0.85 -1.9 2,282,472 + Psest_2140 0.85 -2.0 2,282,847 + -1.5 2,282,847 + -0.3 2,282,865 + -0.1 2,282,865 + +1.9 2,282,865 + -3.0 2,282,865 + -0.9 2,282,865 + -2.3 2,282,865 + -1.5 2,282,866 - -1.9 2,282,866 - -0.6 2,283,051 - -0.1 2,283,349 + Psest_2141 0.27 -2.1 2,283,352 + Psest_2141 0.27 -0.7 2,283,352 + Psest_2141 0.27 -1.7 2,283,353 - Psest_2141 0.27 -2.6 2,283,381 - Psest_2141 0.29 -1.5 2,283,461 - Psest_2141 0.35 -1.0 2,283,527 + Psest_2141 0.39 -2.7 2,283,528 - Psest_2141 0.39 -2.9 2,283,528 - Psest_2141 0.39 -2.3 2,283,587 + Psest_2141 0.43 -2.9 2,283,964 + Psest_2141 0.68 +0.3 2,283,964 + Psest_2141 0.68 -2.1 2,283,965 - Psest_2141 0.69 -2.3 2,283,965 - Psest_2141 0.69 -2.5 2,284,082 + Psest_2141 0.76 -2.7 2,284,145 + Psest_2141 0.81 +0.3 2,284,444 + +0.7 2,284,784 + Psest_2142 0.30 +0.7 2,284,785 - Psest_2142 0.30 -0.3 2,284,785 - Psest_2142 0.30 -0.7 2,284,785 - Psest_2142 0.30 -1.1 2,284,785 - Psest_2142 0.30 -0.7 2,284,785 - Psest_2142 0.30 +0.1 2,284,786 + Psest_2142 0.30 +0.3 2,284,786 + Psest_2142 0.30 +1.2 2,284,786 + Psest_2142 0.30 -0.7 2,284,786 + Psest_2142 0.30 +0.9 2,284,786 + Psest_2142 0.30 -0.4 2,284,786 + Psest_2142 0.30 -0.7 2,284,786 + Psest_2142 0.30 +0.3 2,284,786 + Psest_2142 0.30 -1.4 2,284,787 - Psest_2142 0.30 -0.9 2,284,787 - Psest_2142 0.30 +0.6 2,284,787 - Psest_2142 0.30 +0.9 2,284,787 - Psest_2142 0.30 -0.1 2,284,787 - Psest_2142 0.30 +0.1 2,284,787 - Psest_2142 0.30 -0.9 2,284,817 + Psest_2142 0.33 -1.1 2,284,818 - Psest_2142 0.33 -0.1 2,284,818 - Psest_2142 0.33 -0.4 2,284,819 + Psest_2142 0.33 +0.9 2,284,819 + Psest_2142 0.33 -1.5 2,284,819 + Psest_2142 0.33 +0.4 2,284,820 - Psest_2142 0.33 +0.6 2,284,820 - Psest_2142 0.33 -0.5 2,284,820 - Psest_2142 0.33 -0.1 2,284,820 - Psest_2142 0.33 -0.2 2,284,849 + Psest_2142 0.36 -0.3 2,284,849 + Psest_2142 0.36 +1.3 2,284,849 + Psest_2142 0.36 +1.9 2,284,849 + Psest_2142 0.36 +0.9 2,284,849 + Psest_2142 0.36 -0.4 2,284,849 + Psest_2142 0.36 +1.9 2,284,850 - Psest_2142 0.36 +0.6 2,284,850 - Psest_2142 0.36 -0.5 2,284,850 - Psest_2142 0.36 +0.2 2,284,850 - Psest_2142 0.36 +1.1 2,284,850 - Psest_2142 0.36 -0.9 2,284,850 - Psest_2142 0.36 +0.0 2,284,850 - Psest_2142 0.36 -0.1 2,284,881 + Psest_2142 0.39 +0.3 2,284,881 + Psest_2142 0.39 +0.2 2,284,881 + Psest_2142 0.39 -0.5 2,284,934 + Psest_2142 0.45 +1.3 2,284,934 + Psest_2142 0.45 -0.5 2,284,935 - Psest_2142 0.45 +0.6 2,285,066 - Psest_2142 0.58 -0.7 2,285,078 + Psest_2142 0.59 -1.7 2,285,200 + Psest_2142 0.71 -1.7 2,285,200 + Psest_2142 0.71 +0.3 2,285,200 + Psest_2142 0.71 +0.5 2,285,200 + Psest_2142 0.71 +1.3 2,285,201 - Psest_2142 0.72 -1.1 2,285,201 - Psest_2142 0.72 +1.3 2,285,391 + -0.7 2,285,391 + -0.1
Or see this region's nucleotide sequence