Experiment: Chlorite 0.06 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1765 and Psest_1766 are separated by 154 nucleotides Psest_1766 and Psest_1767 overlap by 1 nucleotides
Psest_1765: Psest_1765 - Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains, at 1,865,823 to 1,867,292
_1765
Psest_1766: Psest_1766 - Signal transduction histidine kinase, at 1,867,447 to 1,868,640
_1766
Psest_1767: Psest_1767 - Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains, at 1,868,640 to 1,870,037
_1767
Position (kb)
1867
1868
1869 Strain fitness (log2 ratio)
-1
0
1
2 at 1866.617 kb on + strand, within Psest_1765 at 1866.732 kb on + strand, within Psest_1765 at 1866.732 kb on + strand, within Psest_1765 at 1866.732 kb on + strand, within Psest_1765 at 1866.935 kb on + strand, within Psest_1765 at 1867.131 kb on + strand, within Psest_1765 at 1867.131 kb on + strand, within Psest_1765 at 1867.131 kb on + strand, within Psest_1765 at 1867.131 kb on + strand, within Psest_1765 at 1867.290 kb on + strand at 1867.291 kb on - strand at 1867.347 kb on + strand at 1867.360 kb on + strand at 1867.361 kb on - strand at 1867.482 kb on - strand at 1867.494 kb on + strand at 1867.494 kb on + strand at 1867.494 kb on + strand at 1867.494 kb on + strand at 1867.494 kb on + strand at 1867.495 kb on - strand at 1867.495 kb on - strand at 1867.495 kb on - strand at 1867.495 kb on - strand at 1867.495 kb on - strand at 1867.589 kb on + strand, within Psest_1766 at 1867.589 kb on + strand, within Psest_1766 at 1867.589 kb on + strand, within Psest_1766 at 1867.589 kb on + strand, within Psest_1766 at 1867.590 kb on - strand, within Psest_1766 at 1867.698 kb on - strand, within Psest_1766 at 1867.772 kb on + strand, within Psest_1766 at 1867.773 kb on - strand, within Psest_1766 at 1867.866 kb on + strand, within Psest_1766 at 1867.866 kb on + strand, within Psest_1766 at 1867.867 kb on - strand, within Psest_1766 at 1867.867 kb on - strand, within Psest_1766 at 1868.025 kb on - strand, within Psest_1766 at 1868.028 kb on + strand, within Psest_1766 at 1868.029 kb on - strand, within Psest_1766 at 1868.029 kb on - strand, within Psest_1766 at 1868.039 kb on + strand, within Psest_1766 at 1868.039 kb on + strand, within Psest_1766 at 1868.040 kb on - strand, within Psest_1766 at 1868.040 kb on - strand, within Psest_1766 at 1868.040 kb on - strand, within Psest_1766 at 1868.040 kb on - strand, within Psest_1766 at 1868.040 kb on - strand, within Psest_1766 at 1868.040 kb on - strand, within Psest_1766 at 1868.040 kb on - strand, within Psest_1766 at 1868.040 kb on - strand, within Psest_1766 at 1868.040 kb on - strand, within Psest_1766 at 1868.041 kb on + strand, within Psest_1766 at 1868.041 kb on + strand, within Psest_1766 at 1868.041 kb on + strand, within Psest_1766 at 1868.041 kb on + strand, within Psest_1766 at 1868.042 kb on - strand, within Psest_1766 at 1868.409 kb on + strand, within Psest_1766 at 1868.409 kb on + strand, within Psest_1766 at 1868.409 kb on + strand, within Psest_1766 at 1868.410 kb on - strand, within Psest_1766 at 1868.410 kb on - strand, within Psest_1766 at 1868.410 kb on - strand, within Psest_1766 at 1868.410 kb on - strand, within Psest_1766 at 1868.410 kb on - strand, within Psest_1766 at 1868.410 kb on - strand, within Psest_1766 at 1868.410 kb on - strand, within Psest_1766 at 1868.653 kb on + strand at 1868.653 kb on + strand at 1868.653 kb on + strand at 1868.653 kb on + strand at 1868.653 kb on + strand at 1868.654 kb on - strand at 1868.654 kb on - strand at 1868.696 kb on + strand at 1868.697 kb on - strand at 1868.698 kb on + strand at 1868.977 kb on + strand, within Psest_1767 at 1868.977 kb on + strand, within Psest_1767 at 1868.977 kb on + strand, within Psest_1767 at 1868.978 kb on - strand, within Psest_1767 at 1868.978 kb on - strand, within Psest_1767 at 1869.048 kb on - strand, within Psest_1767 at 1869.137 kb on - strand, within Psest_1767 at 1869.137 kb on - strand, within Psest_1767 at 1869.137 kb on - strand, within Psest_1767 at 1869.147 kb on + strand, within Psest_1767 at 1869.173 kb on + strand, within Psest_1767 at 1869.173 kb on + strand, within Psest_1767 at 1869.186 kb on - strand, within Psest_1767 at 1869.416 kb on + strand, within Psest_1767 at 1869.416 kb on + strand, within Psest_1767 at 1869.417 kb on - strand, within Psest_1767 at 1869.417 kb on - strand, within Psest_1767 at 1869.419 kb on + strand, within Psest_1767 at 1869.419 kb on + strand, within Psest_1767 at 1869.419 kb on + strand, within Psest_1767 at 1869.419 kb on + strand, within Psest_1767 at 1869.472 kb on + strand, within Psest_1767 at 1869.501 kb on + strand, within Psest_1767 at 1869.501 kb on + strand, within Psest_1767 at 1869.502 kb on - strand, within Psest_1767 at 1869.502 kb on - strand, within Psest_1767 at 1869.502 kb on - strand, within Psest_1767 at 1869.505 kb on - strand, within Psest_1767
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 0.06 mM remove 1,866,617 + Psest_1765 0.54 +1.1 1,866,732 + Psest_1765 0.62 +0.9 1,866,732 + Psest_1765 0.62 +1.2 1,866,732 + Psest_1765 0.62 +1.3 1,866,935 + Psest_1765 0.76 -0.1 1,867,131 + Psest_1765 0.89 +1.5 1,867,131 + Psest_1765 0.89 +0.7 1,867,131 + Psest_1765 0.89 +1.6 1,867,131 + Psest_1765 0.89 +1.3 1,867,290 + -0.2 1,867,291 - +1.3 1,867,347 + +0.5 1,867,360 + -0.4 1,867,361 - +0.6 1,867,482 - +0.3 1,867,494 + -0.2 1,867,494 + -0.6 1,867,494 + -0.4 1,867,494 + +0.1 1,867,494 + -1.0 1,867,495 - -0.4 1,867,495 - +0.8 1,867,495 - +0.7 1,867,495 - +0.4 1,867,495 - +0.3 1,867,589 + Psest_1766 0.12 -0.2 1,867,589 + Psest_1766 0.12 +0.4 1,867,589 + Psest_1766 0.12 +0.8 1,867,589 + Psest_1766 0.12 -0.3 1,867,590 - Psest_1766 0.12 +0.0 1,867,698 - Psest_1766 0.21 +0.8 1,867,772 + Psest_1766 0.27 -0.2 1,867,773 - Psest_1766 0.27 +1.1 1,867,866 + Psest_1766 0.35 -0.2 1,867,866 + Psest_1766 0.35 +0.0 1,867,867 - Psest_1766 0.35 +0.9 1,867,867 - Psest_1766 0.35 +0.9 1,868,025 - Psest_1766 0.48 +0.1 1,868,028 + Psest_1766 0.49 +0.0 1,868,029 - Psest_1766 0.49 +0.9 1,868,029 - Psest_1766 0.49 +0.8 1,868,039 + Psest_1766 0.50 -0.6 1,868,039 + Psest_1766 0.50 -0.1 1,868,040 - Psest_1766 0.50 +0.1 1,868,040 - Psest_1766 0.50 +1.1 1,868,040 - Psest_1766 0.50 -1.1 1,868,040 - Psest_1766 0.50 +0.6 1,868,040 - Psest_1766 0.50 +0.8 1,868,040 - Psest_1766 0.50 -1.1 1,868,040 - Psest_1766 0.50 -0.0 1,868,040 - Psest_1766 0.50 -0.1 1,868,040 - Psest_1766 0.50 -1.4 1,868,041 + Psest_1766 0.50 +0.9 1,868,041 + Psest_1766 0.50 -0.2 1,868,041 + Psest_1766 0.50 -0.2 1,868,041 + Psest_1766 0.50 -0.0 1,868,042 - Psest_1766 0.50 -0.4 1,868,409 + Psest_1766 0.81 +0.8 1,868,409 + Psest_1766 0.81 -0.5 1,868,409 + Psest_1766 0.81 -0.3 1,868,410 - Psest_1766 0.81 +0.3 1,868,410 - Psest_1766 0.81 +0.1 1,868,410 - Psest_1766 0.81 +0.5 1,868,410 - Psest_1766 0.81 +0.0 1,868,410 - Psest_1766 0.81 +1.5 1,868,410 - Psest_1766 0.81 +0.3 1,868,410 - Psest_1766 0.81 +0.8 1,868,653 + -1.2 1,868,653 + -0.7 1,868,653 + -0.5 1,868,653 + +0.2 1,868,653 + -1.0 1,868,654 - +0.2 1,868,654 - -0.7 1,868,696 + +0.4 1,868,697 - +2.0 1,868,698 + +1.5 1,868,977 + Psest_1767 0.24 +0.1 1,868,977 + Psest_1767 0.24 -0.1 1,868,977 + Psest_1767 0.24 +0.0 1,868,978 - Psest_1767 0.24 +0.1 1,868,978 - Psest_1767 0.24 +0.5 1,869,048 - Psest_1767 0.29 +0.0 1,869,137 - Psest_1767 0.36 +0.0 1,869,137 - Psest_1767 0.36 -0.6 1,869,137 - Psest_1767 0.36 +0.1 1,869,147 + Psest_1767 0.36 +1.2 1,869,173 + Psest_1767 0.38 +0.2 1,869,173 + Psest_1767 0.38 -0.7 1,869,186 - Psest_1767 0.39 -0.8 1,869,416 + Psest_1767 0.56 +0.6 1,869,416 + Psest_1767 0.56 +1.6 1,869,417 - Psest_1767 0.56 +1.0 1,869,417 - Psest_1767 0.56 +0.1 1,869,419 + Psest_1767 0.56 -1.0 1,869,419 + Psest_1767 0.56 +1.0 1,869,419 + Psest_1767 0.56 +0.2 1,869,419 + Psest_1767 0.56 -0.8 1,869,472 + Psest_1767 0.60 -0.7 1,869,501 + Psest_1767 0.62 -0.3 1,869,501 + Psest_1767 0.62 +0.3 1,869,502 - Psest_1767 0.62 +0.5 1,869,502 - Psest_1767 0.62 -1.0 1,869,502 - Psest_1767 0.62 -0.5 1,869,505 - Psest_1767 0.62 +0.2
Or see this region's nucleotide sequence