Strain Fitness in Shewanella amazonensis SB2B around Sama_2900

Experiment: Lomefloxacin 0.000390625 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Lomefloxacin 0.000390625 mM
3,447,192	-				-1.6
3,447,192	-				-0.2
3,447,192	-				-1.0
3,447,304	-		Sama_2899	0.18	-0.9
3,447,326	-		Sama_2899	0.20	-3.0
3,447,339	+		Sama_2899	0.22	-1.9
3,447,339	+		Sama_2899	0.22	-1.8
3,447,339	+		Sama_2899	0.22	-1.0
3,447,339	+		Sama_2899	0.22	-1.3
3,447,358	+		Sama_2899	0.24	-1.3
3,447,358	+		Sama_2899	0.24	-0.8
3,447,369	+		Sama_2899	0.25	-1.8
3,447,369	+		Sama_2899	0.25	-0.3
3,447,370	-		Sama_2899	0.25	-2.1
3,447,370	-		Sama_2899	0.25	-1.5
3,447,379	+		Sama_2899	0.26	-1.0
3,447,394	+		Sama_2899	0.27	-1.4
3,447,394	+		Sama_2899	0.27	+0.9
3,447,394	+		Sama_2899	0.27	-0.6
3,447,395	-		Sama_2899	0.27	-0.8
3,447,395	-		Sama_2899	0.27	-3.6
3,447,395	-		Sama_2899	0.27	+2.0
3,447,395	-		Sama_2899	0.27	-1.0
3,447,415	-		Sama_2899	0.29	-1.1
3,447,435	+		Sama_2899	0.31	+0.4
3,447,435	+		Sama_2899	0.31	-0.6
3,447,435	+		Sama_2899	0.31	+1.2
3,447,435	+		Sama_2899	0.31	-1.0
3,447,435	+		Sama_2899	0.31	+0.6
3,447,435	+		Sama_2899	0.31	+0.5
3,447,436	-		Sama_2899	0.32	-0.3
3,447,436	-		Sama_2899	0.32	-0.3
3,447,436	-		Sama_2899	0.32	-1.0
3,447,436	-		Sama_2899	0.32	-0.4
3,447,436	-		Sama_2899	0.32	-0.1
3,447,473	+		Sama_2899	0.35	-0.2
3,447,474	-		Sama_2899	0.35	-1.1
3,447,474	-		Sama_2899	0.35	+0.2
3,447,474	-		Sama_2899	0.35	-0.2
3,447,474	-		Sama_2899	0.35	-0.8
3,447,509	+		Sama_2899	0.39	-2.7
3,447,509	+		Sama_2899	0.39	-0.9
3,447,509	+		Sama_2899	0.39	-1.5
3,447,509	+		Sama_2899	0.39	-1.0
3,447,509	+		Sama_2899	0.39	-1.7
3,447,509	+		Sama_2899	0.39	-0.0
3,447,510	-		Sama_2899	0.39	-1.5
3,447,510	-		Sama_2899	0.39	-1.5
3,447,512	+		Sama_2899	0.39	-0.7
3,447,512	+		Sama_2899	0.39	-1.3
3,447,513	-		Sama_2899	0.39	+1.2
3,447,513	-		Sama_2899	0.39	-1.5
3,447,572	+		Sama_2899	0.45	-1.6
3,447,573	-		Sama_2899	0.45	-1.5
3,447,590	+		Sama_2899	0.47	-1.2
3,447,590	+		Sama_2899	0.47	-2.1
3,447,591	-		Sama_2899	0.47	-0.5
3,447,591	-		Sama_2899	0.47	-0.6
3,447,591	-		Sama_2899	0.47	-2.8
3,447,591	-		Sama_2899	0.47	-1.9
3,447,615	-		Sama_2899	0.50	-0.8
3,447,615	-		Sama_2899	0.50	-0.5
3,447,615	-		Sama_2899	0.50	+1.2
3,447,626	+		Sama_2899	0.51	+0.4
3,447,665	+		Sama_2899	0.55	-0.5
3,447,665	+		Sama_2899	0.55	+0.2
3,447,665	+		Sama_2899	0.55	-1.7
3,447,665	+		Sama_2899	0.55	-0.4
3,447,670	+		Sama_2899	0.55	-0.0
3,447,670	+		Sama_2899	0.55	-1.0
3,447,671	-		Sama_2899	0.55	-0.9
3,447,689	-		Sama_2899	0.57	-0.0
3,447,701	+		Sama_2899	0.58	-0.5
3,447,701	+		Sama_2899	0.58	-0.8
3,447,701	+		Sama_2899	0.58	-1.6
3,447,701	+		Sama_2899	0.58	-0.8
3,447,701	+		Sama_2899	0.58	+0.4
3,447,701	+		Sama_2899	0.58	+1.0
3,447,702	-		Sama_2899	0.59	-1.3
3,447,702	-		Sama_2899	0.59	-0.9
3,447,702	-		Sama_2899	0.59	+2.0
3,447,702	-		Sama_2899	0.59	-0.1
3,447,705	+		Sama_2899	0.59	-0.6
3,447,705	+		Sama_2899	0.59	-0.2
3,447,705	+		Sama_2899	0.59	-1.0
3,447,705	+		Sama_2899	0.59	-0.3
3,447,706	-		Sama_2899	0.59	+1.5
3,447,706	-		Sama_2899	0.59	-2.3
3,447,706	-		Sama_2899	0.59	-0.3
3,447,706	-		Sama_2899	0.59	-0.6
3,447,721	+		Sama_2899	0.60	-2.8
3,447,722	-		Sama_2899	0.61	-1.7
3,447,722	-		Sama_2899	0.61	-0.7
3,447,733	+		Sama_2899	0.62	-2.3
3,447,733	+		Sama_2899	0.62	-0.4
3,447,733	+		Sama_2899	0.62	-0.9
3,447,733	+		Sama_2899	0.62	-2.5
3,447,734	-		Sama_2899	0.62	-1.3
3,447,734	-		Sama_2899	0.62	-0.8
3,447,734	-		Sama_2899	0.62	-0.8
3,447,758	-		Sama_2899	0.64	-0.1
3,447,766	-		Sama_2899	0.65	-0.5
3,447,782	+		Sama_2899	0.67	-2.1
3,447,782	+		Sama_2899	0.67	-1.6
3,447,888	+		Sama_2899	0.77	-0.6
3,447,888	+		Sama_2899	0.77	+0.5
3,447,889	-		Sama_2899	0.78	-1.4
3,447,916	-		Sama_2899	0.80	-0.2
3,447,916	-		Sama_2899	0.80	-1.0
3,447,916	-		Sama_2899	0.80	-1.2
3,447,916	-		Sama_2899	0.80	+0.1
3,447,916	-		Sama_2899	0.80	-1.1
3,447,970	-		Sama_2899	0.86	+1.0
3,447,970	-		Sama_2899	0.86	-1.1
3,447,970	-		Sama_2899	0.86	+0.4
3,447,970	-		Sama_2899	0.86	-0.3
3,447,972	+		Sama_2899	0.86	-2.6
3,447,972	+		Sama_2899	0.86	-0.2
3,448,209	+				-1.3
3,448,209	+				-0.6
3,448,209	+				+0.2
3,448,210	-				-0.3
3,448,219	+				-2.5
3,448,219	+				-0.0
3,448,220	-				-0.6
3,448,220	-				-1.8
3,448,275	+				-0.9
3,448,275	+				+0.2
3,448,275	+				-1.6
3,448,276	-				-1.5
3,448,276	-				-1.6
3,448,276	-				-0.6
3,448,277	+				-1.7
3,448,277	+				-2.0
3,448,277	+				-2.0
3,448,277	+				-0.5
3,448,277	+				-0.8
3,448,277	+				-1.7
3,448,277	+				-0.0
3,448,277	+				-2.0
3,448,278	-				+0.4
3,448,278	-				-1.4
3,448,278	-				-0.9
3,448,278	-				-2.3
3,448,278	-				-2.5
3,448,278	-				-1.3
3,448,290	-		Sama_2900	0.10	+0.2
3,448,290	-		Sama_2900	0.10	-0.0
3,448,317	+		Sama_2900	0.13	-1.6
3,448,373	+		Sama_2900	0.19	-0.6
3,448,373	+		Sama_2900	0.19	-2.2
3,448,373	+		Sama_2900	0.19	-1.3
3,448,373	+		Sama_2900	0.19	-2.2
3,448,374	-		Sama_2900	0.19	-3.0
3,448,374	-		Sama_2900	0.19	+0.3
3,448,374	-		Sama_2900	0.19	-1.3
3,448,385	+		Sama_2900	0.20	-1.9
3,448,385	+		Sama_2900	0.20	-0.8
3,448,386	-		Sama_2900	0.20	-1.8
3,448,386	-		Sama_2900	0.20	-1.3
3,448,386	-		Sama_2900	0.20	+0.7
3,448,386	-		Sama_2900	0.20	-0.7
3,448,407	+		Sama_2900	0.22	-3.3
3,448,408	-		Sama_2900	0.22	-1.8
3,448,408	-		Sama_2900	0.22	-1.0
3,448,421	+		Sama_2900	0.24	-1.5
3,448,427	+		Sama_2900	0.24	-2.4
3,448,427	+		Sama_2900	0.24	-1.5
3,448,427	+		Sama_2900	0.24	-0.4
3,448,427	+		Sama_2900	0.24	-1.2
3,448,427	+		Sama_2900	0.24	-0.8
3,448,428	-		Sama_2900	0.25	+1.0
3,448,428	-		Sama_2900	0.25	-1.1
3,448,428	-		Sama_2900	0.25	-2.0
3,448,506	-		Sama_2900	0.33	-1.4
3,448,506	-		Sama_2900	0.33	-0.7
3,448,565	+		Sama_2900	0.39	-0.9
3,448,588	+		Sama_2900	0.41	-0.7
3,448,588	+		Sama_2900	0.41	-0.3
3,448,588	+		Sama_2900	0.41	+1.0
3,448,588	+		Sama_2900	0.41	-0.3
3,448,588	+		Sama_2900	0.41	-0.8
3,448,589	-		Sama_2900	0.41	-0.6
3,448,631	+		Sama_2900	0.45	-1.7
3,448,631	+		Sama_2900	0.45	-1.7
3,448,631	+		Sama_2900	0.45	+1.8
3,448,632	-		Sama_2900	0.45	-1.8
3,448,642	+		Sama_2900	0.46	+0.8
3,448,642	+		Sama_2900	0.46	-3.0
3,448,642	+		Sama_2900	0.46	-0.1
3,448,775	+		Sama_2900	0.60	-2.4
3,448,775	+		Sama_2900	0.60	+1.2
3,448,776	-		Sama_2900	0.60	-0.9
3,448,776	-		Sama_2900	0.60	-1.2
3,448,776	-		Sama_2900	0.60	-0.6
3,448,776	-		Sama_2900	0.60	-1.2
3,448,776	-		Sama_2900	0.60	-0.1
3,448,776	-		Sama_2900	0.60	-1.5
3,448,776	-		Sama_2900	0.60	-0.0
3,448,776	-		Sama_2900	0.60	-0.7
3,448,779	+		Sama_2900	0.61	-1.5
3,448,779	+		Sama_2900	0.61	-1.5
3,448,779	+		Sama_2900	0.61	+1.2
3,448,779	+		Sama_2900	0.61	+0.2
3,448,779	+		Sama_2900	0.61	-0.8
3,448,779	+		Sama_2900	0.61	-1.6
3,448,780	-		Sama_2900	0.61	-1.6
3,448,780	-		Sama_2900	0.61	+1.4
3,448,780	-		Sama_2900	0.61	-1.5
3,448,780	-		Sama_2900	0.61	-0.1
3,448,780	-		Sama_2900	0.61	-0.3
3,448,780	-		Sama_2900	0.61	-1.2
3,448,780	-		Sama_2900	0.61	-0.6
3,448,780	-		Sama_2900	0.61	-2.7
3,448,780	-		Sama_2900	0.61	-0.0
3,448,780	-		Sama_2900	0.61	-1.0
3,448,853	+		Sama_2900	0.68	-0.6
3,448,853	+		Sama_2900	0.68	+0.1
3,448,853	+		Sama_2900	0.68	-1.0
3,448,853	+		Sama_2900	0.68	-2.2
3,448,854	-		Sama_2900	0.68	-1.2
3,448,854	-		Sama_2900	0.68	-2.0
3,448,854	-		Sama_2900	0.68	-0.4
3,448,854	-		Sama_2900	0.68	-0.9
3,448,854	-		Sama_2900	0.68	-1.7
3,448,946	+		Sama_2900	0.78	-0.7
3,448,947	-		Sama_2900	0.78	-1.0
3,448,947	-		Sama_2900	0.78	-0.9
3,448,990	-		Sama_2900	0.82	-0.0
3,449,032	+		Sama_2900	0.86	-0.8
3,449,033	-		Sama_2900	0.87	-1.4
3,449,033	-		Sama_2900	0.87	+0.4
3,449,033	-		Sama_2900	0.87	-1.5
3,449,061	+		Sama_2900	0.89	-1.5
3,449,062	-		Sama_2900	0.90	+1.0
3,449,114	-				-1.8
3,449,117	-				-0.8
3,449,133	+				-1.5
3,449,271	-				-1.2
3,449,277	+				+0.5
3,449,320	-				-0.6
3,449,363	+				-0.0
3,449,363	+				+1.0
3,449,364	-				-0.7
3,449,385	+				-1.2
3,449,401	-				-0.5
3,449,405	-				-1.0
3,449,479	-				-1.6
3,449,565	+				-1.2
3,449,583	+				+0.1
3,449,585	+				-1.1
3,449,585	+				+0.8
3,449,586	-				-2.3
3,449,655	+		Sama_2901	0.22	-0.2
3,449,655	+		Sama_2901	0.22	+0.2
3,449,744	+		Sama_2901	0.39	-1.7
3,449,744	+		Sama_2901	0.39	-2.6
3,449,745	-		Sama_2901	0.39	-1.6
3,449,767	+		Sama_2901	0.44	-1.4
3,449,801	+		Sama_2901	0.50	-3.2
3,449,801	+		Sama_2901	0.50	+0.3
3,449,801	+		Sama_2901	0.50	-1.3
3,449,801	+		Sama_2901	0.50	-1.1
3,449,801	+		Sama_2901	0.50	-0.5
3,449,802	-		Sama_2901	0.50	-1.6
3,449,802	-		Sama_2901	0.50	-3.0
3,449,802	-		Sama_2901	0.50	-0.1
3,449,850	+		Sama_2901	0.60	-0.2
3,449,851	-		Sama_2901	0.60	-1.4
3,449,872	+		Sama_2901	0.64	-1.0
3,449,873	-		Sama_2901	0.64	-0.6
3,449,978	+		Sama_2901	0.85	+0.3
3,449,984	+		Sama_2901	0.86	-1.8
3,449,985	-		Sama_2901	0.86	-1.1
3,449,985	-		Sama_2901	0.86	-1.2
3,449,991	+		Sama_2901	0.87	-0.3
3,449,994	+		Sama_2901	0.88	-1.7
3,449,995	-		Sama_2901	0.88	-1.5
3,450,059	+				-2.0
3,450,059	+				-0.3
3,450,141	+				-0.4
3,450,141	+				-0.5
3,450,141	+				-1.2
3,450,141	+				+0.4
3,450,142	-				-1.5
3,450,142	-				-0.4
3,450,142	-				-0.2
3,450,142	-				-3.4
3,450,142	-				-0.6
3,450,142	-				+0.2
3,450,142	-				-0.4
3,450,142	-				-0.4
3,450,151	+				-0.7
3,450,152	+				-0.8
3,450,152	+				+0.3
3,450,152	+				+0.4
3,450,152	+				-1.4
3,450,152	+				+0.2
3,450,152	+				+0.5
3,450,152	+				-0.5
3,450,152	+				-1.1
3,450,152	+				-0.1
3,450,152	+				+0.5
3,450,152	+				-1.7
3,450,152	+				-0.0
3,450,152	+				-0.8
3,450,152	+				-0.5
3,450,152	+				+0.8
3,450,152	+				-1.0
3,450,152	+				-0.4
3,450,153	-				-0.4
3,450,153	-				-1.1
3,450,153	-				-1.0
3,450,153	-				+0.4
3,450,153	-				-1.3
3,450,153	-				-1.4
3,450,153	-				-0.0
3,450,153	-				+0.3
3,450,153	-				-0.1
3,450,153	-				+0.4
3,450,153	-				+0.7
3,450,153	-				-0.0
3,450,153	-				-0.6
3,450,153	-				-1.6
3,450,153	-				-1.3
3,450,153	-				-0.1
3,450,153	-				-1.0
3,450,153	-				-1.0