Strain Fitness in Shewanella amazonensis SB2B around Sama_2745

Experiment: Lomefloxacin 0.000390625 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Lomefloxacin 0.000390625 mM
3,282,036	-		Sama_2744	0.75	-2.1
3,282,054	+		Sama_2744	0.75	-1.5
3,282,055	-		Sama_2744	0.75	-0.9
3,282,070	+		Sama_2744	0.76	-2.4
3,282,070	+		Sama_2744	0.76	+0.2
3,282,070	+		Sama_2744	0.76	-0.7
3,282,145	+		Sama_2744	0.78	+0.1
3,282,145	+		Sama_2744	0.78	+0.7
3,282,168	-		Sama_2744	0.79	-1.7
3,282,175	+		Sama_2744	0.79	-0.9
3,282,175	+		Sama_2744	0.79	-0.5
3,282,175	+		Sama_2744	0.79	+0.6
3,282,175	+		Sama_2744	0.79	-1.1
3,282,175	+		Sama_2744	0.79	-1.5
3,282,175	+		Sama_2744	0.79	-0.6
3,282,175	+		Sama_2744	0.79	-1.1
3,282,175	+		Sama_2744	0.79	-2.4
3,282,176	-		Sama_2744	0.79	+1.0
3,282,176	-		Sama_2744	0.79	+0.7
3,282,176	-		Sama_2744	0.79	+0.1
3,282,177	+		Sama_2744	0.79	+1.1
3,282,177	+		Sama_2744	0.79	-0.3
3,282,177	+		Sama_2744	0.79	-1.3
3,282,177	+		Sama_2744	0.79	+0.5
3,282,177	+		Sama_2744	0.79	-0.4
3,282,177	+		Sama_2744	0.79	-2.5
3,282,177	+		Sama_2744	0.79	-0.4
3,282,177	+		Sama_2744	0.79	+0.4
3,282,177	+		Sama_2744	0.79	+0.3
3,282,177	+		Sama_2744	0.79	+0.2
3,282,177	+		Sama_2744	0.79	+1.6
3,282,177	+		Sama_2744	0.79	-1.0
3,282,177	+		Sama_2744	0.79	+0.3
3,282,177	+		Sama_2744	0.79	-0.4
3,282,177	+		Sama_2744	0.79	-0.1
3,282,178	-		Sama_2744	0.79	-0.0
3,282,178	-		Sama_2744	0.79	-1.5
3,282,178	-		Sama_2744	0.79	-2.6
3,282,178	-		Sama_2744	0.79	-1.2
3,282,178	-		Sama_2744	0.79	-0.7
3,282,178	-		Sama_2744	0.79	+1.3
3,282,178	-		Sama_2744	0.79	+0.3
3,282,178	-		Sama_2744	0.79	-0.5
3,282,178	-		Sama_2744	0.79	-0.4
3,282,178	-		Sama_2744	0.79	-3.6
3,282,178	-		Sama_2744	0.79	-1.5
3,282,178	-		Sama_2744	0.79	-0.2
3,282,259	+		Sama_2744	0.82	-0.7
3,282,266	+		Sama_2744	0.82	-0.6
3,282,266	+		Sama_2744	0.82	-1.0
3,282,266	+		Sama_2744	0.82	-1.5
3,282,266	+		Sama_2744	0.82	-0.3
3,282,266	+		Sama_2744	0.82	-2.5
3,282,266	+		Sama_2744	0.82	+1.3
3,282,266	+		Sama_2744	0.82	+0.3
3,282,266	+		Sama_2744	0.82	-3.6
3,282,267	-		Sama_2744	0.82	-0.8
3,282,267	-		Sama_2744	0.82	-1.2
3,282,267	-		Sama_2744	0.82	-1.0
3,282,267	-		Sama_2744	0.82	+0.7
3,282,267	-		Sama_2744	0.82	+0.3
3,282,280	+		Sama_2744	0.82	-1.0
3,282,280	+		Sama_2744	0.82	-0.1
3,282,280	+		Sama_2744	0.82	-0.3
3,282,281	-		Sama_2744	0.82	+0.7
3,282,282	+		Sama_2744	0.82	-1.2
3,282,296	+		Sama_2744	0.83	-1.4
3,282,297	-		Sama_2744	0.83	-2.0
3,282,354	+		Sama_2744	0.85	-0.2
3,282,354	+		Sama_2744	0.85	+2.3
3,282,354	+		Sama_2744	0.85	-0.2
3,282,354	+		Sama_2744	0.85	-0.2
3,282,354	+		Sama_2744	0.85	+0.5
3,282,354	+		Sama_2744	0.85	+0.3
3,282,354	+		Sama_2744	0.85	-2.0
3,282,354	+		Sama_2744	0.85	-1.8
3,282,355	-		Sama_2744	0.85	-1.4
3,282,355	-		Sama_2744	0.85	-2.1
3,282,355	-		Sama_2744	0.85	-1.0
3,282,355	-		Sama_2744	0.85	-1.3
3,282,355	-		Sama_2744	0.85	-0.1
3,282,355	-		Sama_2744	0.85	-2.5
3,282,355	-		Sama_2744	0.85	-0.9
3,282,355	-		Sama_2744	0.85	-1.9
3,282,403	+		Sama_2744	0.86	-2.4
3,282,403	+		Sama_2744	0.86	-0.6
3,282,403	+		Sama_2744	0.86	+0.5
3,282,403	+		Sama_2744	0.86	-0.9
3,282,403	+		Sama_2744	0.86	+0.5
3,282,403	+		Sama_2744	0.86	-1.7
3,282,403	+		Sama_2744	0.86	+0.3
3,282,404	-		Sama_2744	0.86	-0.3
3,282,404	-		Sama_2744	0.86	-1.9
3,282,404	-		Sama_2744	0.86	-0.5
3,282,404	-		Sama_2744	0.86	-0.0
3,282,404	-		Sama_2744	0.86	+2.1
3,282,407	-		Sama_2744	0.86	+1.0
3,282,606	+				-1.0
3,282,606	+				+0.1
3,282,606	+				-2.1
3,282,606	+				-0.5
3,282,606	+				+0.6
3,282,607	-				-0.5
3,282,669	+				+0.5
3,282,669	+				-0.4
3,282,670	-				-0.0
3,282,686	+				-0.3
3,282,687	-				-1.2
3,282,687	-				+1.3
3,282,687	-				-0.7
3,282,693	+				-0.6
3,282,694	-				-0.0
3,282,712	+				-0.3
3,282,790	+				+0.4
3,282,932	+				-2.7
3,283,041	-				-2.1
3,283,064	+		Sama_2745	0.13	-0.0
3,283,126	+		Sama_2745	0.23	+0.4
3,283,127	-		Sama_2745	0.23	-1.6
3,283,127	-		Sama_2745	0.23	-1.3
3,283,134	+		Sama_2745	0.24	-0.0
3,283,212	+		Sama_2745	0.37	-1.3
3,283,212	+		Sama_2745	0.37	-0.7
3,283,212	+		Sama_2745	0.37	-0.7
3,283,212	+		Sama_2745	0.37	-0.4
3,283,212	+		Sama_2745	0.37	-0.0
3,283,213	-		Sama_2745	0.37	-1.7
3,283,213	-		Sama_2745	0.37	-2.4
3,283,213	-		Sama_2745	0.37	+0.3
3,283,213	-		Sama_2745	0.37	-1.2
3,283,213	-		Sama_2745	0.37	-0.7
3,283,213	-		Sama_2745	0.37	-0.0
3,283,213	-		Sama_2745	0.37	-0.4
3,283,228	-		Sama_2745	0.39	-1.3
3,283,238	+		Sama_2745	0.41	+0.9
3,283,239	-		Sama_2745	0.41	+0.4
3,283,253	+		Sama_2745	0.43	-2.1
3,283,254	-		Sama_2745	0.43	-0.4
3,283,338	-		Sama_2745	0.56	+0.2
3,283,346	+		Sama_2745	0.58	-1.6
3,283,346	+		Sama_2745	0.58	-2.0
3,283,346	+		Sama_2745	0.58	-0.8
3,283,346	+		Sama_2745	0.58	-1.0
3,283,346	+		Sama_2745	0.58	-1.5
3,283,346	+		Sama_2745	0.58	+0.5
3,283,346	+		Sama_2745	0.58	-1.5
3,283,347	-		Sama_2745	0.58	-1.3
3,283,347	-		Sama_2745	0.58	-1.8
3,283,347	-		Sama_2745	0.58	-1.5
3,283,347	-		Sama_2745	0.58	-0.7
3,283,347	-		Sama_2745	0.58	-0.4
3,283,347	-		Sama_2745	0.58	-0.9
3,283,347	-		Sama_2745	0.58	-1.3
3,283,348	+		Sama_2745	0.58	-0.4
3,283,348	+		Sama_2745	0.58	-0.5
3,283,348	+		Sama_2745	0.58	-1.0
3,283,349	-		Sama_2745	0.58	-0.5
3,283,349	-		Sama_2745	0.58	+0.3
3,283,349	-		Sama_2745	0.58	-1.5
3,283,349	-		Sama_2745	0.58	-0.3
3,283,349	-		Sama_2745	0.58	-1.4
3,283,388	-		Sama_2745	0.64	-0.7
3,283,416	+		Sama_2745	0.69	-0.2
3,283,492	-		Sama_2745	0.80	-0.5
3,283,492	-		Sama_2745	0.80	-0.2
3,283,492	-		Sama_2745	0.80	+1.1
3,283,492	-		Sama_2745	0.80	-1.5
3,283,492	-		Sama_2745	0.80	-0.5
3,283,604	+				+0.1
3,283,650	-				-1.3
3,283,688	-				-0.5
3,283,698	+				-1.1
3,283,788	+				-0.7
3,283,788	+				-1.5
3,283,789	-				-1.6
3,283,789	-				-1.5
3,283,789	-				-0.7
3,283,789	-				-0.8
3,283,789	-				-2.3
3,283,826	+				-0.6
3,283,826	+				-0.7
3,283,832	+				+0.7
3,283,832	+				-0.0
3,283,833	-				-0.0
3,283,833	-				-3.0
3,283,833	-				-0.3
3,283,833	-				-0.7
3,283,846	-				-0.5
3,283,904	-				+0.3
3,284,002	+		Sama_2746	0.13	+0.7
3,284,003	-		Sama_2746	0.13	-1.4
3,284,003	-		Sama_2746	0.13	+0.3
3,284,003	-		Sama_2746	0.13	-0.3
3,284,088	+		Sama_2746	0.17	-1.4
3,284,136	+		Sama_2746	0.19	-1.3
3,284,139	-		Sama_2746	0.19	-0.5
3,284,139	-		Sama_2746	0.19	-2.4
3,284,139	-		Sama_2746	0.19	-1.0
3,284,139	-		Sama_2746	0.19	+0.2
3,284,139	-		Sama_2746	0.19	-1.4
3,284,206	+		Sama_2746	0.22	-0.8
3,284,207	-		Sama_2746	0.22	-1.0
3,284,207	-		Sama_2746	0.22	-1.3
3,284,207	-		Sama_2746	0.22	-1.2
3,284,254	+		Sama_2746	0.25	-0.2
3,284,254	+		Sama_2746	0.25	-0.7
3,284,254	+		Sama_2746	0.25	-0.0
3,284,254	+		Sama_2746	0.25	-0.6
3,284,254	+		Sama_2746	0.25	-0.3
3,284,254	+		Sama_2746	0.25	-0.3
3,284,254	+		Sama_2746	0.25	-0.5
3,284,254	+		Sama_2746	0.25	+0.7
3,284,254	+		Sama_2746	0.25	-0.9
3,284,254	+		Sama_2746	0.25	-1.5
3,284,255	-		Sama_2746	0.25	+0.2
3,284,255	-		Sama_2746	0.25	+0.3
3,284,255	-		Sama_2746	0.25	-0.3
3,284,255	-		Sama_2746	0.25	-0.0
3,284,255	-		Sama_2746	0.25	-1.4
3,284,255	-		Sama_2746	0.25	-1.0
3,284,255	-		Sama_2746	0.25	+0.8
3,284,255	-		Sama_2746	0.25	-0.8
3,284,255	-		Sama_2746	0.25	-1.8
3,284,255	-		Sama_2746	0.25	-0.5
3,284,255	-		Sama_2746	0.25	+0.7
3,284,256	+		Sama_2746	0.25	-0.7
3,284,256	+		Sama_2746	0.25	+0.4
3,284,256	+		Sama_2746	0.25	-1.5
3,284,256	+		Sama_2746	0.25	-0.5
3,284,256	+		Sama_2746	0.25	-0.3
3,284,256	+		Sama_2746	0.25	-0.0
3,284,257	-		Sama_2746	0.25	-2.7
3,284,257	-		Sama_2746	0.25	-1.2
3,284,257	-		Sama_2746	0.25	-1.0
3,284,257	-		Sama_2746	0.25	-0.0
3,284,257	-		Sama_2746	0.25	-1.9
3,284,257	-		Sama_2746	0.25	+0.7
3,284,257	-		Sama_2746	0.25	-0.5
3,284,257	-		Sama_2746	0.25	-1.9
3,284,257	-		Sama_2746	0.25	-1.4
3,284,257	-		Sama_2746	0.25	-0.3
3,284,260	+		Sama_2746	0.25	-1.0
3,284,260	+		Sama_2746	0.25	-1.0
3,284,260	+		Sama_2746	0.25	-0.6
3,284,260	+		Sama_2746	0.25	+0.5
3,284,260	+		Sama_2746	0.25	-0.8
3,284,260	+		Sama_2746	0.25	+0.3
3,284,260	+		Sama_2746	0.25	-0.0
3,284,260	+		Sama_2746	0.25	-0.0
3,284,260	+		Sama_2746	0.25	-0.4
3,284,260	+		Sama_2746	0.25	-0.8
3,284,260	+		Sama_2746	0.25	-0.5
3,284,260	+		Sama_2746	0.25	-0.4
3,284,261	-		Sama_2746	0.25	-1.6
3,284,261	-		Sama_2746	0.25	-0.9
3,284,261	-		Sama_2746	0.25	+0.9
3,284,261	-		Sama_2746	0.25	-1.8
3,284,305	+		Sama_2746	0.27	-1.8
3,284,306	-		Sama_2746	0.27	-1.8
3,284,317	+		Sama_2746	0.27	-0.0
3,284,317	+		Sama_2746	0.27	+0.1
3,284,317	+		Sama_2746	0.27	-1.3
3,284,317	+		Sama_2746	0.27	-1.4
3,284,317	+		Sama_2746	0.27	-1.3
3,284,317	+		Sama_2746	0.27	+1.3
3,284,317	+		Sama_2746	0.27	-0.7
3,284,317	+		Sama_2746	0.27	-0.7
3,284,317	+		Sama_2746	0.27	-0.3
3,284,318	-		Sama_2746	0.27	-1.3
3,284,318	-		Sama_2746	0.27	-1.0
3,284,318	-		Sama_2746	0.27	-1.2
3,284,318	-		Sama_2746	0.27	-0.4
3,284,318	-		Sama_2746	0.27	-1.1
3,284,318	-		Sama_2746	0.27	-1.1
3,284,318	-		Sama_2746	0.27	-1.5
3,284,318	-		Sama_2746	0.27	-0.3
3,284,318	-		Sama_2746	0.27	+1.0
3,284,318	-		Sama_2746	0.27	-2.8
3,284,319	+		Sama_2746	0.28	+0.5
3,284,319	+		Sama_2746	0.28	-0.5
3,284,319	+		Sama_2746	0.28	-0.3
3,284,319	+		Sama_2746	0.28	-0.5
3,284,319	+		Sama_2746	0.28	-1.8
3,284,319	+		Sama_2746	0.28	-0.7
3,284,319	+		Sama_2746	0.28	-0.9
3,284,320	-		Sama_2746	0.28	-1.6
3,284,320	-		Sama_2746	0.28	-2.0
3,284,320	-		Sama_2746	0.28	-0.5
3,284,320	-		Sama_2746	0.28	+1.7
3,284,320	-		Sama_2746	0.28	-0.6
3,284,320	-		Sama_2746	0.28	-1.0
3,284,410	+		Sama_2746	0.32	+0.4
3,284,410	+		Sama_2746	0.32	+0.6
3,284,410	+		Sama_2746	0.32	-1.7
3,284,410	+		Sama_2746	0.32	+3.9
3,284,410	+		Sama_2746	0.32	+0.1
3,284,411	-		Sama_2746	0.32	-1.0
3,284,552	-		Sama_2746	0.38	-0.0
3,284,579	-		Sama_2746	0.39	-2.9
3,284,579	-		Sama_2746	0.39	-1.9
3,284,611	+		Sama_2746	0.41	-1.2
3,284,611	+		Sama_2746	0.41	-0.5
3,284,611	+		Sama_2746	0.41	-1.7
3,284,611	+		Sama_2746	0.41	-1.4
3,284,612	-		Sama_2746	0.41	-1.3
3,284,612	-		Sama_2746	0.41	+0.5
3,284,612	-		Sama_2746	0.41	-1.9
3,284,612	-		Sama_2746	0.41	+0.6
3,284,612	-		Sama_2746	0.41	-1.0
3,284,612	-		Sama_2746	0.41	+0.7