Strain Fitness in Shewanella amazonensis SB2B around Sama_2707

Experiment: Lomefloxacin 0.000390625 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Lomefloxacin 0.000390625 mM
3,238,401	+				-0.1
3,238,401	+				-0.7
3,238,402	-				+0.8
3,238,402	-				-0.4
3,238,402	-				-1.0
3,238,402	-				-1.3
3,238,402	-				-0.3
3,238,402	-				-2.3
3,238,402	-				-0.2
3,238,402	-				-1.0
3,238,420	-				-1.3
3,238,489	+				-0.6
3,238,490	-				-0.6
3,238,490	-				-0.6
3,238,513	+				-0.9
3,238,513	+				-1.2
3,238,513	+				-0.8
3,238,513	+				-0.6
3,238,571	+				-1.2
3,238,608	+		Sama_2706	0.11	+1.6
3,238,608	+		Sama_2706	0.11	-1.3
3,238,608	+		Sama_2706	0.11	+0.5
3,238,608	+		Sama_2706	0.11	+0.1
3,238,609	-		Sama_2706	0.12	-1.6
3,238,609	-		Sama_2706	0.12	-0.8
3,238,609	-		Sama_2706	0.12	-1.0
3,238,609	-		Sama_2706	0.12	-3.0
3,238,609	-		Sama_2706	0.12	+1.4
3,238,778	+		Sama_2706	0.51	+0.4
3,238,778	+		Sama_2706	0.51	-1.5
3,238,779	-		Sama_2706	0.51	+0.0
3,238,830	-		Sama_2706	0.63	-2.4
3,238,834	+		Sama_2706	0.64	-2.2
3,238,834	+		Sama_2706	0.64	+0.9
3,238,835	-		Sama_2706	0.64	+0.8
3,238,835	-		Sama_2706	0.64	-0.5
3,238,860	-		Sama_2706	0.70	+0.2
3,238,896	+		Sama_2706	0.78	-0.7
3,238,896	+		Sama_2706	0.78	-0.4
3,238,896	+		Sama_2706	0.78	-0.5
3,238,897	-		Sama_2706	0.78	+0.1
3,238,897	-		Sama_2706	0.78	-0.2
3,238,897	-		Sama_2706	0.78	-1.3
3,238,897	-		Sama_2706	0.78	-0.5
3,238,897	-		Sama_2706	0.78	+0.5
3,238,919	-		Sama_2706	0.83	-0.5
3,238,974	-				-0.2
3,238,974	-				+0.8
3,238,974	-				+0.4
3,238,974	-				-0.6
3,238,977	+				-0.6
3,238,977	+				+0.1
3,238,977	+				+0.8
3,238,978	-				-0.5
3,238,978	-				-0.3
3,238,990	+				-0.6
3,238,990	+				-2.1
3,238,990	+				-0.2
3,238,991	-				-0.3
3,238,991	-				-0.6
3,238,991	-				-1.9
3,238,991	-				+0.4
3,238,991	-				+0.8
3,239,002	+				-0.9
3,239,002	+				-3.0
3,239,002	+				-3.2
3,239,003	-				+0.1
3,239,003	-				-2.0
3,239,003	-				-0.8
3,239,011	+				-0.2
3,239,012	-				-0.5
3,239,012	-				-0.8
3,239,012	-				-0.2
3,239,012	-				-0.9
3,239,018	-				+0.0
3,239,018	-				-0.6
3,239,054	+				-1.2
3,239,061	+				-1.6
3,239,062	-				-0.3
3,239,062	-				-2.4
3,239,062	-				+0.0
3,239,071	+				-1.2
3,239,072	-				+1.4
3,239,143	+				-0.5
3,239,143	+				+0.4
3,239,143	+				+0.5
3,239,143	+				+0.4
3,239,143	+				-1.0
3,239,144	-				+0.8
3,239,151	-				+0.8
3,239,266	+				-1.6
3,239,266	+				+1.0
3,239,266	+				-1.2
3,239,266	+				-1.6
3,239,266	+				-0.5
3,239,266	+				-0.6
3,239,266	+				+1.1
3,239,266	+				-0.5
3,239,266	+				-1.5
3,239,266	+				+0.1
3,239,266	+				-1.2
3,239,266	+				-2.0
3,239,266	+				-1.7
3,239,266	+				-0.8
3,239,266	+				-2.9
3,239,267	-				+0.4
3,239,267	-				+0.4
3,239,267	-				-1.0
3,239,267	-				+0.6
3,239,267	-				-0.9
3,239,267	-				-1.3
3,239,267	-				+0.2
3,239,267	-				-0.2
3,239,267	-				+0.2
3,239,267	-				-0.8
3,239,267	-				-1.6
3,239,267	-				+1.5
3,239,267	-				-1.4
3,239,267	-				+0.6
3,239,267	-				-0.4
3,239,422	+		Sama_2707	0.10	-0.5
3,239,423	-		Sama_2707	0.11	-1.6
3,239,430	+		Sama_2707	0.12	-0.8
3,239,430	+		Sama_2707	0.12	-0.4
3,239,431	-		Sama_2707	0.13	-0.6
3,239,431	-		Sama_2707	0.13	-1.9
3,239,453	+		Sama_2707	0.18	-1.6
3,239,464	+		Sama_2707	0.20	-2.2
3,239,465	-		Sama_2707	0.21	-1.6
3,239,465	-		Sama_2707	0.21	-1.5
3,239,465	-		Sama_2707	0.21	-0.7
3,239,474	-		Sama_2707	0.23	+1.0
3,239,496	+		Sama_2707	0.28	-0.8
3,239,496	+		Sama_2707	0.28	-1.4
3,239,497	-		Sama_2707	0.28	-1.4
3,239,497	-		Sama_2707	0.28	+0.5
3,239,525	+		Sama_2707	0.35	-1.8
3,239,525	+		Sama_2707	0.35	-1.8
3,239,595	+		Sama_2707	0.52	-0.6
3,239,596	-		Sama_2707	0.52	-0.1
3,239,596	-		Sama_2707	0.52	-0.4
3,239,596	-		Sama_2707	0.52	+0.8
3,239,596	-		Sama_2707	0.52	-2.0
3,239,596	-		Sama_2707	0.52	-1.8
3,239,596	-		Sama_2707	0.52	-2.9
3,239,598	+		Sama_2707	0.52	-1.6
3,239,598	+		Sama_2707	0.52	-1.5
3,239,599	-		Sama_2707	0.53	-0.6
3,239,694	+		Sama_2707	0.75	-1.8
3,239,694	+		Sama_2707	0.75	-0.7
3,239,694	+		Sama_2707	0.75	-1.1
3,239,695	-		Sama_2707	0.75	-1.6
3,239,720	+		Sama_2707	0.81	-1.1
3,239,721	-		Sama_2707	0.82	-0.0
3,239,721	-		Sama_2707	0.82	-1.8
3,239,843	-				-1.1
3,239,898	+				-0.5
3,239,899	-				+0.0
3,239,899	-				-1.9
3,239,899	-				-0.5
3,239,899	-				-2.3
3,239,899	-				-1.4
3,239,899	-				+0.8
3,239,918	+				+1.9
3,239,918	+				-1.2
3,239,918	+				-0.8
3,239,918	+				+0.1
3,239,918	+				-0.1
3,239,918	+				+0.8
3,239,918	+				-1.5
3,239,918	+				-0.1
3,239,919	-				-1.4
3,239,919	-				-0.0
3,239,919	-				-1.2
3,239,919	-				-1.8
3,239,919	-				-0.2
3,239,963	+				-1.5
3,239,964	-				-2.2
3,240,016	+				-1.2
3,240,016	+				-1.2
3,240,017	-				-0.6
3,240,028	+				+1.4
3,240,028	+				-2.9
3,240,028	+				-0.4
3,240,028	+				+0.2
3,240,028	+				-2.0
3,240,028	+				-0.9
3,240,028	+				-0.6
3,240,028	+				+0.4
3,240,028	+				+0.5
3,240,028	+				-1.6
3,240,028	+				-0.5
3,240,029	-				-0.1
3,240,029	-				-1.6
3,240,029	-				-2.4
3,240,029	-				+0.4
3,240,029	-				-0.4
3,240,029	-				-1.6
3,240,029	-				+0.0
3,240,029	-				-1.0
3,240,029	-				-1.6
3,240,029	-				+0.0
3,240,029	-				+0.4
3,240,029	-				+1.1
3,240,036	-				-0.6
3,240,036	-				-0.2
3,240,038	+				-2.2
3,240,038	+				-1.5
3,240,038	+				-1.1
3,240,039	-				-2.6
3,240,078	-				-1.2
3,240,174	-		Sama_2708	0.17	-2.8
3,240,174	-		Sama_2708	0.17	+1.0
3,240,174	-		Sama_2708	0.17	+0.3
3,240,195	+		Sama_2708	0.19	-0.8
3,240,195	+		Sama_2708	0.19	-0.5
3,240,195	+		Sama_2708	0.19	+0.0
3,240,196	-		Sama_2708	0.19	-1.1
3,240,196	-		Sama_2708	0.19	-0.7
3,240,265	+		Sama_2708	0.26	-0.6
3,240,265	+		Sama_2708	0.26	-2.1
3,240,288	+		Sama_2708	0.28	-1.0
3,240,289	-		Sama_2708	0.28	-1.7
3,240,289	-		Sama_2708	0.28	-0.3
3,240,317	+		Sama_2708	0.31	+0.3
3,240,317	+		Sama_2708	0.31	-0.5
3,240,389	+		Sama_2708	0.37	+0.0
3,240,389	+		Sama_2708	0.37	-0.4
3,240,390	-		Sama_2708	0.37	-0.6
3,240,393	+		Sama_2708	0.38	-1.4
3,240,393	+		Sama_2708	0.38	-0.4
3,240,393	+		Sama_2708	0.38	-0.2
3,240,393	+		Sama_2708	0.38	-0.8
3,240,393	+		Sama_2708	0.38	-0.2
3,240,393	+		Sama_2708	0.38	-0.2
3,240,393	+		Sama_2708	0.38	-1.4
3,240,393	+		Sama_2708	0.38	-0.4
3,240,393	+		Sama_2708	0.38	-0.5
3,240,393	+		Sama_2708	0.38	-1.9
3,240,393	+		Sama_2708	0.38	-1.1
3,240,393	+		Sama_2708	0.38	-1.7
3,240,393	+		Sama_2708	0.38	+0.6
3,240,393	+		Sama_2708	0.38	+1.0
3,240,394	-		Sama_2708	0.38	-1.1
3,240,394	-		Sama_2708	0.38	-1.7
3,240,394	-		Sama_2708	0.38	+0.9
3,240,394	-		Sama_2708	0.38	-1.0
3,240,394	-		Sama_2708	0.38	+0.1
3,240,394	-		Sama_2708	0.38	+0.5
3,240,394	-		Sama_2708	0.38	-2.4
3,240,394	-		Sama_2708	0.38	-1.8
3,240,394	-		Sama_2708	0.38	-1.1
3,240,552	+		Sama_2708	0.53	-2.6
3,240,552	+		Sama_2708	0.53	-1.9
3,240,552	+		Sama_2708	0.53	-0.2
3,240,552	+		Sama_2708	0.53	-0.7
3,240,552	+		Sama_2708	0.53	+0.8
3,240,553	-		Sama_2708	0.53	+0.2
3,240,553	-		Sama_2708	0.53	-0.5
3,240,569	+		Sama_2708	0.54	-0.7
3,240,569	+		Sama_2708	0.54	-1.5
3,240,582	+		Sama_2708	0.55	+0.0
3,240,646	-		Sama_2708	0.61	-2.4
3,240,646	-		Sama_2708	0.61	-2.4
3,240,675	+		Sama_2708	0.64	-1.2
3,240,675	+		Sama_2708	0.64	-1.9
3,240,675	+		Sama_2708	0.64	-1.8
3,240,675	+		Sama_2708	0.64	+0.3
3,240,676	-		Sama_2708	0.64	-1.0
3,240,735	+		Sama_2708	0.70	-0.1
3,240,736	-		Sama_2708	0.70	+0.3
3,240,736	-		Sama_2708	0.70	-1.1
3,240,744	+		Sama_2708	0.71	-0.9
3,240,744	+		Sama_2708	0.71	+0.5
3,240,767	+		Sama_2708	0.73	-0.7