Strain Fitness in Shewanella amazonensis SB2B around Sama_2395

Experiment: Lomefloxacin 0.000390625 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Lomefloxacin 0.000390625 mM
2,877,460	+		Sama_2394	0.43	-0.4
2,877,460	+		Sama_2394	0.43	-2.0
2,877,469	-		Sama_2394	0.43	-1.6
2,877,511	+		Sama_2394	0.46	+0.9
2,877,511	+		Sama_2394	0.46	-0.5
2,877,511	-		Sama_2394	0.46	-0.9
2,877,512	-		Sama_2394	0.46	-2.2
2,877,542	-		Sama_2394	0.48	-0.9
2,877,558	+		Sama_2394	0.49	-1.1
2,877,562	+		Sama_2394	0.49	-0.9
2,877,562	+		Sama_2394	0.49	+1.8
2,877,562	+		Sama_2394	0.49	+0.0
2,877,562	+		Sama_2394	0.49	-1.5
2,877,562	+		Sama_2394	0.49	-2.5
2,877,562	+		Sama_2394	0.49	-1.5
2,877,562	+		Sama_2394	0.49	-0.3
2,877,562	+		Sama_2394	0.49	-1.4
2,877,563	-		Sama_2394	0.49	+1.6
2,877,563	-		Sama_2394	0.49	-1.5
2,877,563	-		Sama_2394	0.49	-0.6
2,877,707	+		Sama_2394	0.57	-0.6
2,877,707	+		Sama_2394	0.57	-1.3
2,877,707	+		Sama_2394	0.57	+1.1
2,877,708	-		Sama_2394	0.57	-0.3
2,877,736	-		Sama_2394	0.59	-0.4
2,877,736	-		Sama_2394	0.59	+2.2
2,877,736	-		Sama_2394	0.59	-1.0
2,877,736	-		Sama_2394	0.59	+0.3
2,877,989	+		Sama_2394	0.74	-0.2
2,878,002	+		Sama_2394	0.75	-0.6
2,878,002	+		Sama_2394	0.75	+0.3
2,878,003	-		Sama_2394	0.75	-1.4
2,878,004	+		Sama_2394	0.75	-1.7
2,878,004	+		Sama_2394	0.75	-0.2
2,878,004	+		Sama_2394	0.75	-1.5
2,878,004	+		Sama_2394	0.75	-0.6
2,878,004	+		Sama_2394	0.75	-1.0
2,878,005	-		Sama_2394	0.75	-0.3
2,878,005	-		Sama_2394	0.75	-0.2
2,878,005	-		Sama_2394	0.75	-2.8
2,878,041	+		Sama_2394	0.77	-0.1
2,878,042	-		Sama_2394	0.77	+0.9
2,878,072	+		Sama_2394	0.79	-2.2
2,878,073	-		Sama_2394	0.79	-1.3
2,878,073	-		Sama_2394	0.79	-0.4
2,878,073	-		Sama_2394	0.79	-1.2
2,878,157	+		Sama_2394	0.84	-1.2
2,878,157	+		Sama_2394	0.84	-1.0
2,878,158	-		Sama_2394	0.84	+0.9
2,878,158	-		Sama_2394	0.84	-0.2
2,878,158	-		Sama_2394	0.84	-0.7
2,878,193	-		Sama_2394	0.86	-1.2
2,878,263	-				+1.0
2,878,263	-				-0.8
2,878,288	-				+0.0
2,878,360	+				+0.6
2,878,363	+				-0.3
2,878,364	-				-1.2
2,878,364	-				-1.0
2,878,407	+				+0.0
2,878,408	-				+0.0
2,878,421	-				+0.0
2,878,573	-		Sama_2395	0.18	+0.4
2,878,581	+		Sama_2395	0.19	+0.3
2,878,581	+		Sama_2395	0.19	-1.8
2,878,582	-		Sama_2395	0.19	-2.1
2,878,582	-		Sama_2395	0.19	+1.0
2,878,587	+		Sama_2395	0.20	-0.4
2,878,587	+		Sama_2395	0.20	-1.8
2,878,588	-		Sama_2395	0.20	-1.3
2,878,588	-		Sama_2395	0.20	-0.5
2,878,612	+		Sama_2395	0.23	+0.4
2,878,612	+		Sama_2395	0.23	+0.5
2,878,613	-		Sama_2395	0.23	-0.4
2,878,641	+		Sama_2395	0.27	-1.9
2,878,674	-		Sama_2395	0.32	-0.4
2,878,761	+		Sama_2395	0.44	+1.6
2,878,762	-		Sama_2395	0.44	-2.7
2,878,762	-		Sama_2395	0.44	+0.0
2,878,762	-		Sama_2395	0.44	-0.5
2,878,762	-		Sama_2395	0.44	-0.2
2,878,762	-		Sama_2395	0.44	-0.9
2,878,811	+		Sama_2395	0.51	-0.3
2,878,836	+		Sama_2395	0.54	-1.6
2,878,836	+		Sama_2395	0.54	+0.6
2,878,856	+		Sama_2395	0.57	+0.8
2,878,896	-		Sama_2395	0.62	-0.9
2,879,009	+		Sama_2395	0.78	-0.7
2,879,075	+		Sama_2395	0.87	+0.1
2,879,075	+		Sama_2395	0.87	+0.7
2,879,198	+				+0.1
2,879,198	+				+0.3
2,879,199	-				-0.1
2,879,206	+				-1.6
2,879,207	-				-0.9
2,879,207	-				-0.1
2,879,258	-				-0.5
2,879,286	+				+0.0
2,879,286	+				+1.6
2,879,286	+				-1.4
2,879,287	-				-1.3
2,879,287	-				+0.3
2,879,287	-				-1.4
2,879,287	-				-2.2
2,879,431	+				-1.7
2,879,431	+				-2.7
2,879,431	+				-0.4
2,879,431	+				+0.0
2,879,431	+				+0.9
2,879,431	+				-0.2
2,879,431	+				-1.9
2,879,431	+				+0.4
2,879,432	-				+0.3
2,879,432	-				+1.3
2,879,432	-				-1.1
2,879,432	-				+0.6
2,879,432	-				-0.5
2,879,438	+				-0.1
2,879,440	+				+0.6
2,879,440	+				-1.0
2,879,440	+				-1.6
2,879,441	-				-0.4
2,879,441	-				-0.9
2,879,441	-				-1.0
2,879,441	-				-2.0
2,879,441	-				-0.2
2,879,444	+				+0.3
2,879,444	+				-0.3
2,879,444	+				+1.2
2,879,444	+				+1.0
2,879,444	+				+0.3
2,879,444	+				-1.3
2,879,444	+				+0.5
2,879,444	+				-0.4
2,879,444	+				-1.3
2,879,444	+				-0.4
2,879,444	+				+0.1
2,879,444	+				+0.6
2,879,444	+				-2.3
2,879,445	-				-1.6
2,879,445	-				+0.9
2,879,445	-				+0.3
2,879,445	-				-1.4
2,879,445	-				-0.2
2,879,445	-				-2.4
2,879,445	-				-1.0
2,879,454	+				+1.6
2,879,455	-				-0.9
2,879,474	+				+0.6
2,879,474	+				-0.7
2,879,474	+				-1.6
2,879,474	+				-2.4
2,879,474	+				-1.0
2,879,475	-				-0.6
2,879,475	-				-1.4
2,879,475	-				-0.4
2,879,475	-				-1.0
2,879,475	-				-0.4
2,879,523	+				-1.0
2,879,524	-				-2.7
2,879,546	+				+0.3
2,879,546	+				-1.1
2,879,547	-				+0.3
2,879,547	-				+0.0
2,879,547	-				-2.4
2,879,547	-				-1.7
2,879,556	+				+0.3
2,879,556	+				-0.4
2,879,556	+				-0.4
2,879,556	+				-0.9
2,879,557	-				-0.5
2,879,557	-				-0.6
2,879,557	-				-2.4
2,879,557	-				+0.9
2,879,557	-				-0.7
2,879,557	-				-0.9
2,879,568	+				-1.6
2,879,569	-				-0.6
2,879,569	-				-1.0
2,879,636	+				-0.7
2,879,636	+				+0.0
2,879,636	+				-0.4
2,879,636	+				-0.4
2,879,637	-				-0.5
2,879,637	-				-1.1
2,879,637	-				-0.6
2,879,637	-				+0.0
2,879,646	-				+0.0
2,879,695	-		Sama_2396	0.15	-1.2
2,879,735	+		Sama_2396	0.22	+0.0
2,879,735	+		Sama_2396	0.22	+1.0
2,879,736	-		Sama_2396	0.22	+1.4
2,879,747	+		Sama_2396	0.24	-1.6
2,879,756	+		Sama_2396	0.25	+0.6
2,879,756	+		Sama_2396	0.25	+0.3
2,879,756	+		Sama_2396	0.25	+3.2
2,879,756	+		Sama_2396	0.25	-1.4
2,879,757	-		Sama_2396	0.26	-2.4
2,879,801	+		Sama_2396	0.33	-0.7
2,879,804	+		Sama_2396	0.34	+0.2
2,879,815	-		Sama_2396	0.36	-2.9
2,879,848	+		Sama_2396	0.41	-1.0
2,879,848	+		Sama_2396	0.41	-0.9
2,879,848	+		Sama_2396	0.41	-0.2
2,879,848	+		Sama_2396	0.41	-0.1
2,879,848	+		Sama_2396	0.41	-2.3
2,879,848	+		Sama_2396	0.41	-1.2
2,879,849	-		Sama_2396	0.41	-0.9
2,879,849	-		Sama_2396	0.41	-0.6
2,879,849	-		Sama_2396	0.41	+0.0
2,879,849	-		Sama_2396	0.41	+0.6
2,879,849	-		Sama_2396	0.41	+1.8
2,879,924	+		Sama_2396	0.54	+0.1
2,879,924	+		Sama_2396	0.54	-0.6
2,879,924	+		Sama_2396	0.54	+0.3
2,879,924	+		Sama_2396	0.54	-0.2
2,879,925	-		Sama_2396	0.54	-1.8
2,879,925	-		Sama_2396	0.54	-0.9
2,879,925	-		Sama_2396	0.54	+1.4
2,879,925	-		Sama_2396	0.54	+0.0
2,879,925	-		Sama_2396	0.54	-2.2
2,879,925	-		Sama_2396	0.54	-0.6
2,879,926	+		Sama_2396	0.55	-1.7
2,879,926	+		Sama_2396	0.55	-1.9
2,879,926	+		Sama_2396	0.55	+1.0
2,879,926	+		Sama_2396	0.55	-1.7
2,879,926	+		Sama_2396	0.55	-0.3
2,879,927	-		Sama_2396	0.55	+1.1
2,879,927	-		Sama_2396	0.55	+0.4
2,879,927	-		Sama_2396	0.55	-1.3
2,879,927	-		Sama_2396	0.55	-1.1
2,879,927	-		Sama_2396	0.55	+0.2
2,879,928	+		Sama_2396	0.55	+0.7
2,879,928	+		Sama_2396	0.55	-0.6
2,879,928	+		Sama_2396	0.55	-0.3
2,879,929	-		Sama_2396	0.55	-0.0
2,879,929	-		Sama_2396	0.55	-1.2
2,879,929	-		Sama_2396	0.55	+0.0
2,879,929	-		Sama_2396	0.55	-1.4
2,879,929	-		Sama_2396	0.55	-1.1
2,879,929	-		Sama_2396	0.55	-1.6
2,879,929	-		Sama_2396	0.55	-1.2
2,879,929	-		Sama_2396	0.55	+0.0
2,879,929	-		Sama_2396	0.55	-1.1
2,879,980	-		Sama_2396	0.64	-2.2
2,879,980	-		Sama_2396	0.64	-0.2
2,879,980	-		Sama_2396	0.64	-1.7
2,880,046	+		Sama_2396	0.75	+0.0
2,880,059	-		Sama_2396	0.77	-0.2