Strain Fitness in Shewanella amazonensis SB2B around Sama_2076

Experiment: Lomefloxacin 0.000390625 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Lomefloxacin 0.000390625 mM
2,513,560	-		Sama_2074	0.87	-1.4
2,513,695	+				-0.5
2,513,704	+				-1.2
2,513,711	+				-1.3
2,513,711	+				-2.3
2,513,711	+				+0.7
2,513,711	+				-0.1
2,513,712	-				+0.7
2,513,712	-				+1.4
2,513,712	-				-0.1
2,513,712	-				-0.9
2,513,721	-				-0.7
2,513,732	+				-0.7
2,513,756	+				-0.5
2,513,757	-				-0.3
2,513,757	-				-0.9
2,513,757	-				+1.3
2,513,757	-				+1.1
2,513,761	+				-0.3
2,513,768	-				+0.9
2,513,770	+				+1.0
2,513,770	+				-0.5
2,513,797	+				-1.5
2,513,797	+				-1.7
2,513,797	+				-0.7
2,513,798	-				-2.1
2,513,800	+				-0.6
2,513,801	-				-0.0
2,513,801	-				-1.0
2,513,801	-				+0.2
2,513,801	-				-1.5
2,513,801	-				+1.1
2,513,852	-				-1.5
2,513,865	-				-1.7
2,513,865	-				-0.6
2,513,881	+				-0.6
2,513,882	-				+0.7
2,513,883	+				+0.1
2,513,939	+				-1.1
2,514,015	-		Sama_2075	0.18	-0.4
2,514,102	-		Sama_2075	0.38	-1.6
2,514,220	+		Sama_2075	0.66	-0.3
2,514,220	+		Sama_2075	0.66	-0.2
2,514,220	+		Sama_2075	0.66	-0.6
2,514,220	+		Sama_2075	0.66	+2.7
2,514,220	+		Sama_2075	0.66	+1.4
2,514,220	+		Sama_2075	0.66	-1.2
2,514,220	+		Sama_2075	0.66	-0.2
2,514,220	+		Sama_2075	0.66	-1.1
2,514,221	-		Sama_2075	0.66	-0.5
2,514,221	-		Sama_2075	0.66	-0.1
2,514,221	-		Sama_2075	0.66	-1.5
2,514,221	-		Sama_2075	0.66	+1.7
2,514,221	-		Sama_2075	0.66	+0.4
2,514,221	-		Sama_2075	0.66	+0.4
2,514,224	+		Sama_2075	0.67	-1.4
2,514,225	-		Sama_2075	0.67	+1.1
2,514,225	-		Sama_2075	0.67	-0.7
2,514,225	-		Sama_2075	0.67	-0.7
2,514,241	+		Sama_2075	0.71	+0.3
2,514,242	-		Sama_2075	0.71	-0.2
2,514,251	+		Sama_2075	0.73	+0.1
2,514,252	-		Sama_2075	0.73	+1.3
2,514,270	+		Sama_2075	0.77	+1.5
2,514,270	+		Sama_2075	0.77	-1.7
2,514,270	+		Sama_2075	0.77	-1.1
2,514,270	+		Sama_2075	0.77	+0.1
2,514,271	-		Sama_2075	0.78	+0.1
2,514,271	-		Sama_2075	0.78	-1.3
2,514,271	-		Sama_2075	0.78	-0.5
2,514,271	-		Sama_2075	0.78	-0.0
2,514,278	+		Sama_2075	0.79	-1.4
2,514,279	-		Sama_2075	0.80	-0.8
2,514,308	+		Sama_2075	0.86	+0.5
2,514,322	+		Sama_2075	0.90	-1.1
2,514,349	+				-1.1
2,514,349	+				-0.5
2,514,364	-				-0.6
2,514,458	-				-0.3
2,514,484	+				-1.4
2,514,498	-				+0.4
2,514,517	-				+0.1
2,514,517	-				-0.9
2,514,517	-				-0.3
2,514,528	-				+0.4
2,514,553	+				+0.7
2,514,553	+				-0.5
2,514,554	-				+0.1
2,514,555	+				-1.4
2,514,708	+		Sama_2076	0.26	-0.9
2,514,782	+		Sama_2076	0.37	+0.0
2,514,782	+		Sama_2076	0.37	-0.1
2,514,782	+		Sama_2076	0.37	-1.9
2,514,783	-		Sama_2076	0.37	-0.6
2,514,783	-		Sama_2076	0.37	-1.2
2,514,783	-		Sama_2076	0.37	-2.0
2,514,868	+		Sama_2076	0.49	-0.2
2,514,868	+		Sama_2076	0.49	-1.3
2,514,935	+		Sama_2076	0.58	+0.4
2,514,948	+		Sama_2076	0.60	-2.1
2,514,949	-		Sama_2076	0.60	-0.9
2,514,949	-		Sama_2076	0.60	-0.3
2,515,015	-		Sama_2076	0.69	-1.1
2,515,030	-		Sama_2076	0.71	+0.9
2,515,030	-		Sama_2076	0.71	-1.2
2,515,052	+		Sama_2076	0.74	-1.9
2,515,053	-		Sama_2076	0.74	-1.7
2,515,190	+				-1.1
2,515,328	+				-0.1
2,515,329	-				+1.6
2,515,331	+				-1.0
2,515,332	-				+0.4
2,515,332	-				+1.4
2,515,338	+				+1.6
2,515,339	-				-1.1
2,515,398	+				+1.4
2,515,493	+		Sama_2077	0.15	-1.2
2,515,505	+		Sama_2077	0.16	+0.4
2,515,505	+		Sama_2077	0.16	+2.0
2,515,505	+		Sama_2077	0.16	-0.6
2,515,506	-		Sama_2077	0.16	-0.7
2,515,506	-		Sama_2077	0.16	+0.9
2,515,506	-		Sama_2077	0.16	-1.1
2,515,506	-		Sama_2077	0.16	-1.6
2,515,506	-		Sama_2077	0.16	-1.2
2,515,509	-		Sama_2077	0.16	-0.3
2,515,509	-		Sama_2077	0.16	+0.3
2,515,509	-		Sama_2077	0.16	+1.1
2,515,509	-		Sama_2077	0.16	-1.5
2,515,586	-		Sama_2077	0.22	-1.3
2,515,599	+		Sama_2077	0.23	-0.7
2,515,599	+		Sama_2077	0.23	-0.7
2,515,600	-		Sama_2077	0.23	-0.5
2,515,600	-		Sama_2077	0.23	-0.7
2,515,670	+		Sama_2077	0.29	+0.4
2,515,670	+		Sama_2077	0.29	-0.9
2,515,670	+		Sama_2077	0.29	-0.6
2,515,670	+		Sama_2077	0.29	+1.0
2,515,670	+		Sama_2077	0.29	+2.0
2,515,671	-		Sama_2077	0.29	-1.0
2,515,693	-		Sama_2077	0.30	-0.9
2,515,693	-		Sama_2077	0.30	+0.4
2,515,693	-		Sama_2077	0.30	+0.3
2,515,711	-		Sama_2077	0.32	-1.4
2,515,722	-		Sama_2077	0.33	-0.6
2,515,730	-		Sama_2077	0.33	+0.5
2,515,745	+		Sama_2077	0.34	-1.7
2,515,745	+		Sama_2077	0.34	-0.1
2,515,746	-		Sama_2077	0.35	-0.5
2,515,746	-		Sama_2077	0.35	+0.8
2,515,746	-		Sama_2077	0.35	+0.4
2,515,799	-		Sama_2077	0.39	-0.7
2,515,799	-		Sama_2077	0.39	-0.5
2,515,799	-		Sama_2077	0.39	+1.1
2,515,799	-		Sama_2077	0.39	-0.3
2,515,799	-		Sama_2077	0.39	+0.5
2,515,831	+		Sama_2077	0.41	+0.4
2,515,832	-		Sama_2077	0.41	+0.7
2,515,832	-		Sama_2077	0.41	-0.3
2,515,832	-		Sama_2077	0.41	-0.1
2,515,868	+		Sama_2077	0.44	-0.4
2,515,957	+		Sama_2077	0.51	+0.0
2,515,965	+		Sama_2077	0.52	-0.3
2,515,965	+		Sama_2077	0.52	-0.6
2,515,966	-		Sama_2077	0.52	-0.3
2,515,966	-		Sama_2077	0.52	+0.7
2,515,966	-		Sama_2077	0.52	-1.3
2,516,053	-		Sama_2077	0.58	-0.1
2,516,072	+		Sama_2077	0.60	-1.5
2,516,090	+		Sama_2077	0.61	-0.6
2,516,169	+		Sama_2077	0.67	+0.9
2,516,170	-		Sama_2077	0.67	+0.7
2,516,170	-		Sama_2077	0.67	+0.2
2,516,170	-		Sama_2077	0.67	-1.7
2,516,195	+		Sama_2077	0.69	+0.1
2,516,196	-		Sama_2077	0.69	+1.1
2,516,235	+		Sama_2077	0.72	+0.4