Strain Fitness in Shewanella amazonensis SB2B around Sama_1615

Experiment: Lomefloxacin 0.000390625 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Lomefloxacin 0.000390625 mM
1,972,546	-				+0.8
1,972,679	-				+2.6
1,972,722	-				-0.4
1,972,724	+				-0.1
1,972,724	+				+0.1
1,972,725	-				-1.3
1,972,725	-				-0.1
1,972,725	-				+0.6
1,972,725	-				-0.8
1,972,769	+				+0.1
1,972,769	+				-0.0
1,972,845	+				+0.8
1,972,846	-				-1.4
1,972,889	-				+1.3
1,972,889	-				-1.6
1,972,892	+				-0.2
1,972,892	+				-0.8
1,972,892	+				+0.6
1,973,388	+				+1.2
1,973,389	-				+0.4
1,973,408	+				-0.4
1,973,522	-				+1.4
1,973,522	-				-0.4
1,973,525	-				-2.1
1,973,525	-				-1.1
1,973,525	-				+2.2
1,973,525	-				+0.1
1,973,525	-				-0.5
1,973,529	-				+1.1
1,973,570	-				-1.1
1,973,570	-				-0.2
1,973,588	-				-0.7
1,973,636	-				-0.4
1,973,659	-				+0.3
1,973,659	-				+1.8
1,973,659	-				+0.1
1,973,662	+				+0.1
1,973,662	+				-1.6
1,973,662	+				+0.6
1,973,662	+				-1.7
1,973,663	-				-1.2
1,973,697	-				-0.5
1,973,706	+				+0.1
1,973,707	-				+2.3
1,973,707	-				-2.1
1,973,855	+				-1.2
1,973,856	-				-0.2
1,973,869	+				+0.3
1,973,869	+				-1.7
1,973,870	-				-0.5
1,973,917	-		Sama_1615	0.11	-1.9
1,973,930	+		Sama_1615	0.11	+0.3
1,973,931	-		Sama_1615	0.11	+0.2
1,973,931	-		Sama_1615	0.11	-1.3
1,973,936	+		Sama_1615	0.11	+0.6
1,973,976	+		Sama_1615	0.12	+0.3
1,974,005	+		Sama_1615	0.13	-0.2
1,974,006	-		Sama_1615	0.13	-1.1
1,974,006	-		Sama_1615	0.13	-0.2
1,974,009	+		Sama_1615	0.13	-1.6
1,974,096	+		Sama_1615	0.15	-2.7
1,974,097	-		Sama_1615	0.15	-0.9
1,974,277	-		Sama_1615	0.20	+1.1
1,974,277	-		Sama_1615	0.20	-2.0
1,974,277	-		Sama_1615	0.20	+0.2
1,974,322	-		Sama_1615	0.21	-0.2
1,974,322	-		Sama_1615	0.21	-0.1
1,974,387	-		Sama_1615	0.23	+1.3
1,974,387	-		Sama_1615	0.23	-1.3
1,974,387	-		Sama_1615	0.23	+1.5
1,974,405	+		Sama_1615	0.23	+0.3
1,974,433	-		Sama_1615	0.24	-2.3
1,974,519	-		Sama_1615	0.26	-0.8
1,974,699	+		Sama_1615	0.31	-1.4
1,974,699	+		Sama_1615	0.31	+1.1
1,974,699	+		Sama_1615	0.31	-1.7
1,974,700	-		Sama_1615	0.31	+1.1
1,974,700	-		Sama_1615	0.31	-2.1
1,974,773	+		Sama_1615	0.33	-0.4
1,974,773	+		Sama_1615	0.33	+3.1
1,974,773	+		Sama_1615	0.33	-0.9
1,974,774	-		Sama_1615	0.33	-1.3
1,974,774	-		Sama_1615	0.33	-1.6
1,974,774	-		Sama_1615	0.33	-1.1
1,974,776	-		Sama_1615	0.33	-1.7
1,974,776	-		Sama_1615	0.33	-0.7
1,974,776	-		Sama_1615	0.33	+0.6
1,974,942	+		Sama_1615	0.37	+1.1
1,975,070	+		Sama_1615	0.40	+0.3
1,975,071	-		Sama_1615	0.40	-1.4
1,975,071	-		Sama_1615	0.40	-1.4
1,975,074	+		Sama_1615	0.40	+1.6
1,975,075	-		Sama_1615	0.40	+0.1
1,975,075	-		Sama_1615	0.40	-1.7
1,975,075	-		Sama_1615	0.40	-2.1
1,975,075	-		Sama_1615	0.40	+1.0
1,975,075	-		Sama_1615	0.40	-1.6
1,975,075	-		Sama_1615	0.40	-0.2
1,975,075	-		Sama_1615	0.40	-1.6
1,975,077	-		Sama_1615	0.40	-0.4
1,975,122	-		Sama_1615	0.42	-1.6
1,975,164	-		Sama_1615	0.43	-1.2
1,975,203	-		Sama_1615	0.44	-2.1
1,975,239	+		Sama_1615	0.45	-0.7
1,975,240	-		Sama_1615	0.45	-1.3
1,975,240	-		Sama_1615	0.45	-1.4
1,975,240	-		Sama_1615	0.45	-1.5
1,975,437	+		Sama_1615	0.50	-0.2
1,975,489	+		Sama_1615	0.51	+0.0
1,975,490	-		Sama_1615	0.51	-0.5
1,975,725	+		Sama_1615	0.57	+0.6
1,975,728	+		Sama_1615	0.57	-1.9
1,975,729	-		Sama_1615	0.57	-3.1
1,975,763	+		Sama_1615	0.58	-0.6
1,975,770	+		Sama_1615	0.58	-0.6
1,975,771	-		Sama_1615	0.58	-0.7
1,976,027	+		Sama_1615	0.65	-1.4
1,976,028	-		Sama_1615	0.65	+0.6
1,976,028	-		Sama_1615	0.65	-0.4
1,976,127	-		Sama_1615	0.67	-0.1
1,976,203	+		Sama_1615	0.69	-2.4
1,976,203	+		Sama_1615	0.69	-0.5
1,976,204	-		Sama_1615	0.69	+0.1
1,976,429	+		Sama_1615	0.75	-0.5
1,976,429	+		Sama_1615	0.75	-1.9
1,976,430	-		Sama_1615	0.75	-0.3
1,976,430	-		Sama_1615	0.75	-1.6
1,976,465	+		Sama_1615	0.76	+1.6
1,976,505	-		Sama_1615	0.77	-2.0
1,976,520	-		Sama_1615	0.77	+0.3
1,976,520	-		Sama_1615	0.77	+0.1
1,976,562	+		Sama_1615	0.79	-0.9
1,976,562	+		Sama_1615	0.79	-0.9
1,976,563	-		Sama_1615	0.79	-1.4
1,976,724	-		Sama_1615	0.83	-2.1
1,976,776	-		Sama_1615	0.84	-1.3
1,976,776	-		Sama_1615	0.84	-1.1
1,976,791	-		Sama_1615	0.84	-1.8
1,976,791	-		Sama_1615	0.84	+0.6
1,976,875	-		Sama_1615	0.87	+1.2
1,976,889	+		Sama_1615	0.87	+0.1
1,976,890	-		Sama_1615	0.87	-0.8
1,976,890	-		Sama_1615	0.87	+0.6
1,976,912	+		Sama_1615	0.87	-0.4
1,976,912	+		Sama_1615	0.87	-0.5
1,976,912	+		Sama_1615	0.87	+0.1
1,976,912	+		Sama_1615	0.87	+2.1
1,976,913	-		Sama_1615	0.88	-0.7
1,976,913	-		Sama_1615	0.88	-0.3
1,976,985	+		Sama_1615	0.89	-1.3
1,976,986	-		Sama_1615	0.89	-1.1
1,976,986	-		Sama_1615	0.89	-0.9
1,976,986	-		Sama_1615	0.89	-0.4
1,977,111	+				-0.5
1,977,111	+				-0.7
1,977,111	+				-0.7
1,977,111	+				-2.6
1,977,111	+				-2.0
1,977,112	-				-0.4
1,977,112	-				-1.7
1,977,112	-				-0.8
1,977,112	-				-3.4
1,977,112	-				-0.4
1,977,112	-				-1.9
1,977,112	-				-0.5
1,977,113	+				+0.8
1,977,114	-				+0.6
1,977,114	-				-1.7
1,977,114	-				-1.5
1,977,140	+				+1.3
1,977,154	+				-1.3
1,977,154	+				-1.2
1,977,154	+				-2.0
1,977,155	-				-1.3
1,977,155	-				-0.4
1,977,155	-				+0.1
1,977,266	-				+0.3
1,977,266	-				-0.5
1,977,266	-				+0.1
1,977,266	-				-1.2
1,977,266	-				-1.2
1,977,387	-				+0.1
1,977,399	-				-0.2
1,977,399	-				+0.3
1,977,422	+				-0.2
1,977,422	+				-0.6
1,977,422	+				-1.1
1,977,422	+				+0.6
1,977,422	+				-0.5
1,977,422	+				-0.1
1,977,423	-				-0.7
1,977,423	-				+0.1
1,977,423	-				-3.2
1,977,423	-				+0.1
1,977,423	-				+0.6
1,977,423	-				+0.6
1,977,423	-				+0.3
1,977,425	-				+1.3
1,977,425	-				+0.5
1,977,445	+				-0.9
1,977,446	-				-0.9
1,977,446	+				+0.6
1,977,465	-				-1.1
1,977,465	-				-0.2
1,977,491	+				-0.5
1,977,510	-				-1.5
1,977,528	-				+0.1
1,977,551	-				-0.8
1,977,607	-		Sama_1616	0.12	-1.2
1,977,607	-		Sama_1616	0.12	+0.1
1,977,607	-		Sama_1616	0.12	+1.9
1,977,609	+		Sama_1616	0.12	-1.9
1,977,610	-		Sama_1616	0.12	+0.3
1,977,610	-		Sama_1616	0.12	-2.0
1,977,616	-		Sama_1616	0.12	-0.4
1,977,650	+		Sama_1616	0.14	-0.4
1,977,650	+		Sama_1616	0.14	-0.9
1,977,650	+		Sama_1616	0.14	+0.1
1,977,651	-		Sama_1616	0.14	-0.5
1,977,651	-		Sama_1616	0.14	-2.6
1,977,651	-		Sama_1616	0.14	-0.2
1,977,651	-		Sama_1616	0.14	-0.9
1,977,694	+		Sama_1616	0.16	-2.2
1,977,696	+		Sama_1616	0.16	-1.4
1,977,696	+		Sama_1616	0.16	+0.1
1,977,697	-		Sama_1616	0.16	-1.7
1,977,697	-		Sama_1616	0.16	-0.5
1,977,697	-		Sama_1616	0.16	-0.4
1,977,730	+		Sama_1616	0.18	-0.5
1,977,731	-		Sama_1616	0.18	+0.6
1,977,841	+		Sama_1616	0.24	-2.1
1,977,884	+		Sama_1616	0.27	+1.1
1,977,884	+		Sama_1616	0.27	+0.3
1,977,885	-		Sama_1616	0.27	+0.2
1,977,919	-		Sama_1616	0.28	-1.7
1,977,931	-		Sama_1616	0.29	-2.2
1,977,994	+		Sama_1616	0.33	-1.6
1,977,995	-		Sama_1616	0.33	-2.6
1,978,024	-		Sama_1616	0.34	-0.2
1,978,024	-		Sama_1616	0.34	-0.5
1,978,024	-		Sama_1616	0.34	+0.8
1,978,044	+		Sama_1616	0.35	-0.7
1,978,179	+		Sama_1616	0.43	-0.5
1,978,179	+		Sama_1616	0.43	-0.2
1,978,179	+		Sama_1616	0.43	-0.2
1,978,179	+		Sama_1616	0.43	+1.1
1,978,180	-		Sama_1616	0.43	-2.1
1,978,180	-		Sama_1616	0.43	-0.9
1,978,180	-		Sama_1616	0.43	-1.9
1,978,180	-		Sama_1616	0.43	+1.1
1,978,180	-		Sama_1616	0.43	-0.5
1,978,180	-		Sama_1616	0.43	-0.5
1,978,180	-		Sama_1616	0.43	-0.4
1,978,180	-		Sama_1616	0.43	+0.3
1,978,180	-		Sama_1616	0.43	+0.1
1,978,181	+		Sama_1616	0.43	-0.2
1,978,181	+		Sama_1616	0.43	+1.1
1,978,181	+		Sama_1616	0.43	-1.7
1,978,182	-		Sama_1616	0.43	-2.9
1,978,182	-		Sama_1616	0.43	-1.4
1,978,182	-		Sama_1616	0.43	-0.2
1,978,182	-		Sama_1616	0.43	-1.3
1,978,182	-		Sama_1616	0.43	-0.5
1,978,182	-		Sama_1616	0.43	-1.2
1,978,182	-		Sama_1616	0.43	+2.5
1,978,197	+		Sama_1616	0.44	-0.8
1,978,197	+		Sama_1616	0.44	-1.9
1,978,201	+		Sama_1616	0.44	-0.2
1,978,201	+		Sama_1616	0.44	-1.1
1,978,264	+		Sama_1616	0.47	+0.6
1,978,265	-		Sama_1616	0.47	-1.9
1,978,266	+		Sama_1616	0.47	+0.1
1,978,266	+		Sama_1616	0.47	+0.6
1,978,266	+		Sama_1616	0.47	-0.5
1,978,266	+		Sama_1616	0.47	+0.8
1,978,266	+		Sama_1616	0.47	-1.6
1,978,266	+		Sama_1616	0.47	-0.4
1,978,266	+		Sama_1616	0.47	+0.3
1,978,266	+		Sama_1616	0.47	-1.9
1,978,267	-		Sama_1616	0.47	+0.1
1,978,267	-		Sama_1616	0.47	+0.5
1,978,267	-		Sama_1616	0.47	+0.1
1,978,267	-		Sama_1616	0.47	-0.8
1,978,267	-		Sama_1616	0.47	+1.1
1,978,267	-		Sama_1616	0.47	-1.4
1,978,267	-		Sama_1616	0.47	-1.1
1,978,306	+		Sama_1616	0.50	-1.3
1,978,336	+		Sama_1616	0.51	-0.5
1,978,381	+		Sama_1616	0.54	+0.3
1,978,382	-		Sama_1616	0.54	+1.6
1,978,382	-		Sama_1616	0.54	-1.3