Strain Fitness in Shewanella amazonensis SB2B around Sama_0930

Experiment: Lomefloxacin 0.000390625 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Lomefloxacin 0.000390625 mM
1,121,878	+				-1.5
1,121,879	-				+0.0
1,121,883	-				+0.1
1,121,883	-				-0.2
1,121,883	-				-1.4
1,121,923	+				-1.3
1,121,936	+				-2.4
1,121,936	+				-0.4
1,121,936	+				-0.9
1,121,936	+				-2.6
1,121,937	-				+0.8
1,121,937	-				-1.2
1,121,966	+		Sama_0929	0.10	+0.3
1,121,966	+		Sama_0929	0.10	-0.5
1,121,966	+		Sama_0929	0.10	-1.4
1,121,967	-		Sama_0929	0.10	-1.0
1,122,065	+		Sama_0929	0.20	+0.3
1,122,089	+		Sama_0929	0.23	-0.7
1,122,090	-		Sama_0929	0.23	-0.4
1,122,107	+		Sama_0929	0.25	+0.0
1,122,107	+		Sama_0929	0.25	+0.3
1,122,112	+		Sama_0929	0.25	-0.1
1,122,112	+		Sama_0929	0.25	-1.2
1,122,113	-		Sama_0929	0.25	+0.6
1,122,119	+		Sama_0929	0.26	-0.5
1,122,119	+		Sama_0929	0.26	-0.0
1,122,119	+		Sama_0929	0.26	+0.3
1,122,119	+		Sama_0929	0.26	+1.0
1,122,120	-		Sama_0929	0.26	+2.0
1,122,130	+		Sama_0929	0.27	-0.4
1,122,130	+		Sama_0929	0.27	-0.5
1,122,173	+		Sama_0929	0.31	-0.7
1,122,173	+		Sama_0929	0.31	-0.3
1,122,173	+		Sama_0929	0.31	+1.1
1,122,241	+		Sama_0929	0.38	+0.6
1,122,242	-		Sama_0929	0.38	+0.6
1,122,242	-		Sama_0929	0.38	+0.4
1,122,242	-		Sama_0929	0.38	+0.0
1,122,292	+		Sama_0929	0.43	-2.1
1,122,293	-		Sama_0929	0.44	-0.9
1,122,320	+		Sama_0929	0.46	+3.6
1,122,328	+		Sama_0929	0.47	-1.0
1,122,354	+		Sama_0929	0.50	-0.6
1,122,354	+		Sama_0929	0.50	+0.5
1,122,354	+		Sama_0929	0.50	-2.4
1,122,354	+		Sama_0929	0.50	+0.7
1,122,354	+		Sama_0929	0.50	-0.3
1,122,354	+		Sama_0929	0.50	-0.5
1,122,354	+		Sama_0929	0.50	+0.0
1,122,355	-		Sama_0929	0.50	-0.9
1,122,355	-		Sama_0929	0.50	+0.0
1,122,355	-		Sama_0929	0.50	-1.7
1,122,355	-		Sama_0929	0.50	-1.0
1,122,404	+		Sama_0929	0.55	+0.6
1,122,419	+		Sama_0929	0.57	-0.4
1,122,419	+		Sama_0929	0.57	-1.0
1,122,420	-		Sama_0929	0.57	+0.5
1,122,439	-		Sama_0929	0.59	-3.0
1,122,439	-		Sama_0929	0.59	-1.7
1,122,439	-		Sama_0929	0.59	-0.2
1,122,449	+		Sama_0929	0.60	+0.7
1,122,449	+		Sama_0929	0.60	-0.7
1,122,449	+		Sama_0929	0.60	+0.1
1,122,449	+		Sama_0929	0.60	-0.6
1,122,450	-		Sama_0929	0.60	-1.4
1,122,450	-		Sama_0929	0.60	-1.5
1,122,450	-		Sama_0929	0.60	+0.6
1,122,453	+		Sama_0929	0.60	-1.2
1,122,453	+		Sama_0929	0.60	-0.9
1,122,453	+		Sama_0929	0.60	+1.9
1,122,453	+		Sama_0929	0.60	-1.3
1,122,453	+		Sama_0929	0.60	-1.0
1,122,453	+		Sama_0929	0.60	-0.3
1,122,453	+		Sama_0929	0.60	+0.3
1,122,454	-		Sama_0929	0.60	-0.6
1,122,454	-		Sama_0929	0.60	+1.0
1,122,454	-		Sama_0929	0.60	+0.6
1,122,454	-		Sama_0929	0.60	+1.6
1,122,454	-		Sama_0929	0.60	+0.1
1,122,456	+		Sama_0929	0.60	-1.1
1,122,456	+		Sama_0929	0.60	-1.2
1,122,457	-		Sama_0929	0.60	-0.6
1,122,460	+		Sama_0929	0.61	+1.0
1,122,460	+		Sama_0929	0.61	+0.4
1,122,460	+		Sama_0929	0.61	-1.6
1,122,461	-		Sama_0929	0.61	+0.0
1,122,504	-		Sama_0929	0.65	-0.9
1,122,504	-		Sama_0929	0.65	+0.1
1,122,560	-		Sama_0929	0.71	+1.0
1,122,568	+		Sama_0929	0.72	+0.1
1,122,568	+		Sama_0929	0.72	-0.7
1,122,568	+		Sama_0929	0.72	+0.0
1,122,569	-		Sama_0929	0.72	-1.3
1,122,570	+		Sama_0929	0.72	+0.5
1,122,571	-		Sama_0929	0.72	+0.3
1,122,632	+		Sama_0929	0.78	-0.9
1,122,677	-		Sama_0929	0.83	+0.1
1,122,716	+		Sama_0929	0.87	+0.3
1,122,716	+		Sama_0929	0.87	-1.5
1,122,716	+		Sama_0929	0.87	-0.6
1,122,716	+		Sama_0929	0.87	-1.1
1,122,723	-		Sama_0929	0.88	+2.0
1,122,752	+				-0.5
1,122,758	+				-1.7
1,122,758	+				-0.7
1,122,758	+				+0.3
1,122,759	-				-0.9
1,122,759	-				-0.6
1,122,780	+				+0.3
1,122,780	+				-1.0
1,122,780	+				-0.6
1,122,780	+				-1.4
1,122,780	+				+2.6
1,122,780	+				-2.0
1,122,781	-				+0.3
1,122,781	-				-1.0
1,122,781	-				-0.6
1,122,782	+				+0.6
1,122,782	+				-0.6
1,122,782	+				+1.4
1,122,783	-				-0.1
1,122,783	-				-0.6
1,122,783	-				+0.3
1,122,788	+				-1.2
1,122,788	+				+1.0
1,122,788	+				-0.4
1,122,788	+				-1.0
1,122,788	+				-0.9
1,122,788	+				+0.4
1,122,788	+				-0.2
1,122,788	+				-0.9
1,122,789	-				-1.5
1,122,789	-				+0.3
1,122,789	-				-0.2
1,122,789	-				-0.9
1,122,789	-				-1.3
1,122,789	-				-1.0
1,122,789	-				-1.5
1,122,789	-				+0.1
1,122,833	+				-0.8
1,122,841	-				+1.3
1,122,841	-				-2.4
1,122,848	+				+1.0
1,122,849	-				+0.5
1,122,860	+				+0.4
1,122,861	-				-0.4
1,122,874	+				-1.2
1,122,874	+				-1.3
1,122,874	+				-0.4
1,122,908	+		Sama_0930	0.11	+3.6
1,122,908	+		Sama_0930	0.11	-1.0
1,122,909	-		Sama_0930	0.11	-0.3
1,122,909	-		Sama_0930	0.11	-1.2
1,122,909	-		Sama_0930	0.11	-0.9
1,122,931	+		Sama_0930	0.16	-1.2
1,122,931	+		Sama_0930	0.16	-0.2
1,122,938	-		Sama_0930	0.18	-1.6
1,122,986	-		Sama_0930	0.28	-1.1
1,123,025	-		Sama_0930	0.36	-1.4
1,123,030	+		Sama_0930	0.37	-1.0
1,123,035	-		Sama_0930	0.38	-1.9
1,123,109	-		Sama_0930	0.54	+0.6
1,123,117	+		Sama_0930	0.56	+1.2
1,123,161	-		Sama_0930	0.65	-1.2
1,123,211	+		Sama_0930	0.76	-1.3
1,123,211	+		Sama_0930	0.76	+0.8
1,123,260	-		Sama_0930	0.86	+1.6
1,123,265	-		Sama_0930	0.87	+0.0
1,123,282	+				-0.9
1,123,282	+				-1.9
1,123,289	+				-1.1
1,123,330	+				+0.9
1,123,354	-				-2.4
1,123,357	+				-0.5
1,123,357	+				-1.0
1,123,358	-				-0.4
1,123,447	+				-0.3
1,123,450	+				+0.0
1,123,459	+				+0.5
1,123,471	+				+0.4
1,123,478	-				-0.9
1,123,482	+				+0.6
1,123,482	+				+0.5
1,123,517	+				-1.2
1,123,519	+				-1.4
1,123,544	+				-1.4
1,123,571	+				-1.2
1,123,747	+		Sama_0931	0.12	-0.6
1,123,781	-		Sama_0931	0.13	-0.8
1,123,836	+		Sama_0931	0.14	+0.3
1,123,847	+		Sama_0931	0.15	+1.9
1,123,853	-		Sama_0931	0.15	+0.2
1,123,858	+		Sama_0931	0.15	-0.6
1,123,972	+		Sama_0931	0.18	+1.1
1,124,020	+		Sama_0931	0.19	+0.0
1,124,029	+		Sama_0931	0.20	-1.2
1,124,032	+		Sama_0931	0.20	+0.0
1,124,089	+		Sama_0931	0.21	+0.3
1,124,089	+		Sama_0931	0.21	+1.1
1,124,090	-		Sama_0931	0.21	-1.1
1,124,113	-		Sama_0931	0.22	+0.8
1,124,246	-		Sama_0931	0.26	+0.0
1,124,251	+		Sama_0931	0.26	+0.4
1,124,298	+		Sama_0931	0.27	+1.6
1,124,311	+		Sama_0931	0.27	-1.3