Strain Fitness in Shewanella oneidensis MR-1 around SO2577

Experiment: A22 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.003 mg/ml
2,704,405	-		SO2575	0.37	+0.1
2,704,405	-		SO2575	0.37	-0.8
2,704,514	-		SO2575	0.76	+0.5
2,704,541	+		SO2575	0.85	+1.1
2,704,578	+				+0.1
2,704,609	-				+0.4
2,704,628	+				-0.1
2,704,630	+				-0.4
2,704,630	+				-1.5
2,704,636	-				+0.9
2,704,638	-				-1.4
2,704,638	-				-0.1
2,704,692	+				-1.0
2,704,707	+				-1.4
2,704,713	+				-0.6
2,704,936	+	minC	SO2576	0.35	-3.0
2,704,972	+	minC	SO2576	0.40	-0.3
2,704,978	+	minC	SO2576	0.41	-1.4
2,704,979	+	minC	SO2576	0.41	-0.7
2,704,984	+	minC	SO2576	0.42	-1.4
2,704,986	-	minC	SO2576	0.42	-1.1
2,704,992	-	minC	SO2576	0.43	+0.3
2,705,082	+	minC	SO2576	0.57	+0.3
2,705,271	+	minC	SO2576	0.85	-0.5
2,705,271	+	minC	SO2576	0.85	-0.1
2,705,279	-	minC	SO2576	0.86	-0.7
2,705,311	-				+0.1
2,705,384	+				-1.4
2,705,446	+				-0.7
2,705,468	+				-0.5
2,705,531	+	minD	SO2577	0.16	-0.3
2,705,566	+	minD	SO2577	0.21	-1.8
2,705,574	-	minD	SO2577	0.22	-0.1
2,705,574	-	minD	SO2577	0.22	-0.4
2,705,662	+	minD	SO2577	0.33	-0.1
2,705,698	+	minD	SO2577	0.37	-1.9
2,705,825	+	minD	SO2577	0.53	-0.1
2,705,880	-	minD	SO2577	0.60	-1.4
2,705,903	+	minD	SO2577	0.62	-0.8
2,706,119	-	minD	SO2577	0.89	-0.8
2,706,135	+				-0.9
2,706,607	-				+0.2
2,706,980	-	rnd	SO2580	0.25	+0.7
2,707,060	-	rnd	SO2580	0.32	+0.2
2,707,105	+	rnd	SO2580	0.36	-0.1
2,707,113	-	rnd	SO2580	0.37	+0.0
2,707,152	-	rnd	SO2580	0.40	-0.0
2,707,158	+	rnd	SO2580	0.41	-0.4